Gene Pfl01_3486 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3486 
Symbol 
ID3713669 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3968532 
End bp3969269 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content48% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_349215 
Protein GI77459708 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0000458841 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.13554 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGACC AAACATCTGG CTTTTTCATT ACCCGTCAAA GCGGCGACGT TCTGTGGTTT 
GATGCAATCA CAGCAATCAC TGAACAGTAC AGTGCTACCG CTACAAAGCA CCCTATGGCT
AACGGTGCAA GTTATACTGA TCATGTCACG GTAGATAATC TGAGGTTCTC TGTAAGTGCC
GTTCTCTCGG ACGCTGACTT CAACATCTCC CGACCATTCA TGAATATTAG CGACATCAAT
ACGACCAAGC AGTTCACTAA CAACACAAAG GTCGTTACTC CTGTCGAAGT GAAGCAAACA
AGCAGCATTA ACAGGATTCT TCCTGAAGTG ATCGCACAGT TCACAAAGGA CACTATCCCA
GACGCTTACG TTACTCCCCA ACCGAAGGTT AAGCTTGCGG TGGCTGTAAA GTCTGATCTG
ATCTACATGA TCAACAACCG AGAAGTCTTT GCTTTTGTTG AGTATGCGGG AGACAACGTG
GTTAGATCGT ACCCTAACTG CGTCTTGACG AGCGTAGGAT TTACGGAGGA TGCGTCAAGT
GGAGAGGGGC TATTTCCGGC TATGCAGTTT GAGCAGGTTA GGTTTGCAGA AGTGAAGACC
ATCAAAGTGC GAATCAACAA AGGCCGTAAG ACCGCAGCTA ACAAAAAGGT GCCGACTGAG
AAATCACCGG CTGACGCTCC GTCTAGCTAC ACTCAGAAAA GCTCCTACGA CTATCAAGGT
AAAGCTGCCC CGCAATGA
 
Protein sequence
MADQTSGFFI TRQSGDVLWF DAITAITEQY SATATKHPMA NGASYTDHVT VDNLRFSVSA 
VLSDADFNIS RPFMNISDIN TTKQFTNNTK VVTPVEVKQT SSINRILPEV IAQFTKDTIP
DAYVTPQPKV KLAVAVKSDL IYMINNREVF AFVEYAGDNV VRSYPNCVLT SVGFTEDASS
GEGLFPAMQF EQVRFAEVKT IKVRINKGRK TAANKKVPTE KSPADAPSSY TQKSSYDYQG
KAAPQ