Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_3486 |
Symbol | |
ID | 3713669 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 3968532 |
End bp | 3969269 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_349215 |
Protein GI | 77459708 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0000458841 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.13554 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGACC AAACATCTGG CTTTTTCATT ACCCGTCAAA GCGGCGACGT TCTGTGGTTT GATGCAATCA CAGCAATCAC TGAACAGTAC AGTGCTACCG CTACAAAGCA CCCTATGGCT AACGGTGCAA GTTATACTGA TCATGTCACG GTAGATAATC TGAGGTTCTC TGTAAGTGCC GTTCTCTCGG ACGCTGACTT CAACATCTCC CGACCATTCA TGAATATTAG CGACATCAAT ACGACCAAGC AGTTCACTAA CAACACAAAG GTCGTTACTC CTGTCGAAGT GAAGCAAACA AGCAGCATTA ACAGGATTCT TCCTGAAGTG ATCGCACAGT TCACAAAGGA CACTATCCCA GACGCTTACG TTACTCCCCA ACCGAAGGTT AAGCTTGCGG TGGCTGTAAA GTCTGATCTG ATCTACATGA TCAACAACCG AGAAGTCTTT GCTTTTGTTG AGTATGCGGG AGACAACGTG GTTAGATCGT ACCCTAACTG CGTCTTGACG AGCGTAGGAT TTACGGAGGA TGCGTCAAGT GGAGAGGGGC TATTTCCGGC TATGCAGTTT GAGCAGGTTA GGTTTGCAGA AGTGAAGACC ATCAAAGTGC GAATCAACAA AGGCCGTAAG ACCGCAGCTA ACAAAAAGGT GCCGACTGAG AAATCACCGG CTGACGCTCC GTCTAGCTAC ACTCAGAAAA GCTCCTACGA CTATCAAGGT AAAGCTGCCC CGCAATGA
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Protein sequence | MADQTSGFFI TRQSGDVLWF DAITAITEQY SATATKHPMA NGASYTDHVT VDNLRFSVSA VLSDADFNIS RPFMNISDIN TTKQFTNNTK VVTPVEVKQT SSINRILPEV IAQFTKDTIP DAYVTPQPKV KLAVAVKSDL IYMINNREVF AFVEYAGDNV VRSYPNCVLT SVGFTEDASS GEGLFPAMQF EQVRFAEVKT IKVRINKGRK TAANKKVPTE KSPADAPSSY TQKSSYDYQG KAAPQ
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