| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_3480 |
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| Symbol | |
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| ID | 3713663 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas fluorescens Pf0-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007492 |
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| Strand | + |
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| Start bp | 3962384 |
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| End bp | 3963982 |
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| Gene Length | 1599 bp |
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| Protein Length | 532 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | |
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| Product | recombinase |
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| Protein accession | YP_349209 |
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| Protein GI | 77459702 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000000373145 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.0098808 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAAACAAG CGATTTCCTA CGTTCGATTC TCCAGCGATA GGCAGCGTCA CGGTTCGAGC
GTTGAACGTC AAGAAGGCAT GATTGCTGAT TGGCTCAAAC GGCATCCCGA TTACGAGATG
TCAGACCTGA AGTTTTCCGA CCTAGGCAAG AGCGGTTATC ACGGGGAACA CATCAAAGAG
GCTGGCGGGT TTGGAAAGCT CCTGAAAGCG TTGGAGGATG GTTTCATCAG GGCTGGTGAC
GTGGTGCTGG TTGAGGCCAT AGACCGCACA GGACGCCTTG AACCAATGGA CATGCTGACG
TTGGTTATCA ATCCGATCCT GAAGGCTGGT GTCTCAATCA TCACTCTGGA TGACAACACA
ACGTACTCCA AGGAATCCGT TAACACTGCT CAGATATTCC TGTTGGTGGC GAAGATTCAA
GCTGCTCACG GCTATTCAGC AGCACTCTCA ACCCGCGTTG CCGACTCTTA CAAGAAGCGT
AGAAAGGACG CTGCTAAATA CGGGATCGTC CCTAGACGCA TCACCCCTGT ATGGCTGAAC
CCTGACGGTA CGGTGAGGGA GGATGTAGCG CCATGGATCA AGACAGCCTT TGAGCTGTAC
GTTTCTGGTG TAGGCAAATC GACAATTGCC AAGCGTATGC GTGAAAGCGG CGTTGAAAGA
CTGGCTAAGG CTTCTGGCCC CGGCGTTGAA GGTTGGCTTA GGAACAAGGC TGTGATTGGC
AAGTGGGAGA CGTTAGAAGG CACTCCAGAC CATCAAATCA TTGATGACAT CTACCCTGCG
ATCATTGAAC CATCGTTGTT CTACAAAGCT CAGGTTCACG CTGAGAAGAT GAAGACACAA
CGCCCAATCA AGACAGCAAG CCATTTTCTA GTTGGGCTTG TGAGGTGTGG TGAGTGCGGT
AAGAACTACA TCGTGCAGAA TCTACACGGT AAGCCTCACA GCATGCGTTG CCGTACACGA
CAGAGCCAGA ACGAATGCAC AAACTCTCAC TGTGTACCTA AACCTGTCCT AGATGCTATC
TACAGGTATA CATCTGTCAC AGCAGCTATA GAGGCCGTGC AGCAGCAACA GATGGGCGTC
AATGACAAAG AGATTGTCAC AAGAGAAGCT GAGCTACTGG CAATCACCAA GCGCGTTGAT
GGCCTTGTAC AAGCCCTTAC ACAGACTGGC CCTATACCAG AGGTCATAGA GGCACTTAAA
CAGTCTAGAA TCGAGCGTGA GGCGGCTGAA AGTGCATTAG TGATACTAAG GTCTACGGTT
GTTCCTTCCG CCGGTACACA TTGGCAGGAA ATGGGGAAGG TGTGGAAACT TGAAGCTGCT
GATGCACAGC GCCTAGCAGC TATGCTTAAG TTGGTTGACT ATCACATCAC CGTAGCACCT
ACAGGCGAGA TTACAGCGTC ACATTCTGAA GTGCTGTACA GATACATTGG TGTTGATCGT
GCTCTTGACA AATACAAGCT TCTAGCTAAT GGAAAGCTTA TGCTGATCCC TAAAGGGTAC
GTTGACGACT TCCCTTATCA TGAGCCATTT CAAGAGATGC AGTCGGAAAA CACATGGGAT
GAAGCTGACT ATGACAATCT ACGTCAACAG CACCAATGA
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| Protein sequence | MKQAISYVRF SSDRQRHGSS VERQEGMIAD WLKRHPDYEM SDLKFSDLGK SGYHGEHIKE
AGGFGKLLKA LEDGFIRAGD VVLVEAIDRT GRLEPMDMLT LVINPILKAG VSIITLDDNT
TYSKESVNTA QIFLLVAKIQ AAHGYSAALS TRVADSYKKR RKDAAKYGIV PRRITPVWLN
PDGTVREDVA PWIKTAFELY VSGVGKSTIA KRMRESGVER LAKASGPGVE GWLRNKAVIG
KWETLEGTPD HQIIDDIYPA IIEPSLFYKA QVHAEKMKTQ RPIKTASHFL VGLVRCGECG
KNYIVQNLHG KPHSMRCRTR QSQNECTNSH CVPKPVLDAI YRYTSVTAAI EAVQQQQMGV
NDKEIVTREA ELLAITKRVD GLVQALTQTG PIPEVIEALK QSRIEREAAE SALVILRSTV
VPSAGTHWQE MGKVWKLEAA DAQRLAAMLK LVDYHITVAP TGEITASHSE VLYRYIGVDR
ALDKYKLLAN GKLMLIPKGY VDDFPYHEPF QEMQSENTWD EADYDNLRQQ HQ
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