Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_3464 |
Symbol | |
ID | 3713589 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 3948564 |
End bp | 3949622 |
Gene Length | 1059 bp |
Protein Length | 352 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | |
Product | branched-chain alpha-keto acid dehydrogenase E1 component |
Protein accession | YP_349193 |
Protein GI | 77459686 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.239889 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGATC ACAACAACAA TATTCAGTTG GAAACCGCCA TGACCACGAC CACCATGACC ATGATCCAGG CCCTGCGCTC GGCCATGGAT GTGATGCTTG AGCGTGACGA CAACGTGGTG GTGTTCGGAC AGGACGTCGG CTACTTCGGC GGCGTGTTCC GTTGCACCGA AGGCTTGCAG ACCAAGTACG GCACCTCGCG GGTGTTCGAT GCGCCGATTT CCGAGAGCGG TATCGTCGGC GTCGCGGTGG GCATGGGCGC TTATGGCTTG CGTCCGGTGG CCGAGATTCA GTTCGCCGAC TACGTGTACC CGGCGTCCGA CCAGATCATT TCCGAGGCCG CCCGTCTGCG TTATCGCTCG GCCGGCGAGT TCACCGCCCC GATGACCCTG CGCATGCCTT GCGGCGGTGG CATCTACGGC GGCCAGACCC ACAGCCAGAG CATCGAGGCG ATGTTCACTC AGGTCTGCGG TCTGCGCACC GTCATGCCGT CCAACCCGTA TGACGCCAAA GGCCTGCTGA TCGCCTCCAT CGAAAACGAT GACCCGGTGA TCTTCCTCGA GCCAAAACGC CTGTACAACG GCCCGTTCGA CGGCCACCAC GACCGCCCGG TGACCCCGTG GTCGAAACAC CCGCAAGCCC AGGTGCCGGA CGGTTACTAC ACCGTGCCGC TGGACGTTGC CGCGATTACC CGTCCGGGCA AGGACGTGAC CGTGCTGACC TACGGCACTA CTGTGTACGT GTCGCAAGTC GCTGCTGAAG AAAGCGGCGT TGACGCTGAA GTCATCGACC TGCGCAGCTT GTGGCCGCTG GACCTGGAAA CCATCGTCAA ATCCGTGAAG AAAACCGGCC GTTGCGTCGT GGTTCACGAA GCTACCCGCA CCTGCGGATT CGGCGCCGAA CTGGTGTCGC TGGTGCAAGA GCATTGCTTC CATCACCTGG AAGCGCCGAT CGAACGCGTC ACCGGTTGGG ACACCCCCTA CCCGCACGCG CAGGAGTGGG CGTATTTCCC TGGGCCGTCC CGAGTGGGCG CGGCGCTGAA ACGGGTCATG GAGGTCTGA
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Protein sequence | MNDHNNNIQL ETAMTTTTMT MIQALRSAMD VMLERDDNVV VFGQDVGYFG GVFRCTEGLQ TKYGTSRVFD APISESGIVG VAVGMGAYGL RPVAEIQFAD YVYPASDQII SEAARLRYRS AGEFTAPMTL RMPCGGGIYG GQTHSQSIEA MFTQVCGLRT VMPSNPYDAK GLLIASIEND DPVIFLEPKR LYNGPFDGHH DRPVTPWSKH PQAQVPDGYY TVPLDVAAIT RPGKDVTVLT YGTTVYVSQV AAEESGVDAE VIDLRSLWPL DLETIVKSVK KTGRCVVVHE ATRTCGFGAE LVSLVQEHCF HHLEAPIERV TGWDTPYPHA QEWAYFPGPS RVGAALKRVM EV
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