Gene Pfl01_3464 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3464 
Symbol 
ID3713589 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3948564 
End bp3949622 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content63% 
IMG OID 
Productbranched-chain alpha-keto acid dehydrogenase E1 component 
Protein accessionYP_349193 
Protein GI77459686 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.239889 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGATC ACAACAACAA TATTCAGTTG GAAACCGCCA TGACCACGAC CACCATGACC 
ATGATCCAGG CCCTGCGCTC GGCCATGGAT GTGATGCTTG AGCGTGACGA CAACGTGGTG
GTGTTCGGAC AGGACGTCGG CTACTTCGGC GGCGTGTTCC GTTGCACCGA AGGCTTGCAG
ACCAAGTACG GCACCTCGCG GGTGTTCGAT GCGCCGATTT CCGAGAGCGG TATCGTCGGC
GTCGCGGTGG GCATGGGCGC TTATGGCTTG CGTCCGGTGG CCGAGATTCA GTTCGCCGAC
TACGTGTACC CGGCGTCCGA CCAGATCATT TCCGAGGCCG CCCGTCTGCG TTATCGCTCG
GCCGGCGAGT TCACCGCCCC GATGACCCTG CGCATGCCTT GCGGCGGTGG CATCTACGGC
GGCCAGACCC ACAGCCAGAG CATCGAGGCG ATGTTCACTC AGGTCTGCGG TCTGCGCACC
GTCATGCCGT CCAACCCGTA TGACGCCAAA GGCCTGCTGA TCGCCTCCAT CGAAAACGAT
GACCCGGTGA TCTTCCTCGA GCCAAAACGC CTGTACAACG GCCCGTTCGA CGGCCACCAC
GACCGCCCGG TGACCCCGTG GTCGAAACAC CCGCAAGCCC AGGTGCCGGA CGGTTACTAC
ACCGTGCCGC TGGACGTTGC CGCGATTACC CGTCCGGGCA AGGACGTGAC CGTGCTGACC
TACGGCACTA CTGTGTACGT GTCGCAAGTC GCTGCTGAAG AAAGCGGCGT TGACGCTGAA
GTCATCGACC TGCGCAGCTT GTGGCCGCTG GACCTGGAAA CCATCGTCAA ATCCGTGAAG
AAAACCGGCC GTTGCGTCGT GGTTCACGAA GCTACCCGCA CCTGCGGATT CGGCGCCGAA
CTGGTGTCGC TGGTGCAAGA GCATTGCTTC CATCACCTGG AAGCGCCGAT CGAACGCGTC
ACCGGTTGGG ACACCCCCTA CCCGCACGCG CAGGAGTGGG CGTATTTCCC TGGGCCGTCC
CGAGTGGGCG CGGCGCTGAA ACGGGTCATG GAGGTCTGA
 
Protein sequence
MNDHNNNIQL ETAMTTTTMT MIQALRSAMD VMLERDDNVV VFGQDVGYFG GVFRCTEGLQ 
TKYGTSRVFD APISESGIVG VAVGMGAYGL RPVAEIQFAD YVYPASDQII SEAARLRYRS
AGEFTAPMTL RMPCGGGIYG GQTHSQSIEA MFTQVCGLRT VMPSNPYDAK GLLIASIEND
DPVIFLEPKR LYNGPFDGHH DRPVTPWSKH PQAQVPDGYY TVPLDVAAIT RPGKDVTVLT
YGTTVYVSQV AAEESGVDAE VIDLRSLWPL DLETIVKSVK KTGRCVVVHE ATRTCGFGAE
LVSLVQEHCF HHLEAPIERV TGWDTPYPHA QEWAYFPGPS RVGAALKRVM EV