Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_3463 |
Symbol | |
ID | 3713588 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 3947327 |
End bp | 3948562 |
Gene Length | 1236 bp |
Protein Length | 411 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | |
Product | branched-chain alpha-keto acid dehydrogenase E1 component |
Protein accession | YP_349192 |
Protein GI | 77459685 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.233659 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCAAG CGTATGAACC GCTGCGTCTG CACGTCCCTG AACCCTCGGG CCGCCCAGGC TGCAAAACCG ATTTCTCCTA CCTGCATCTG ACCGATGCCG GCACGGTGCG CAAACCTTCC ATCGACGTAG AACCCGCCGA CACCGCCGAC CTGGCCCGTG GCCTGATCCG CGTGCTCGAC GACCAGGGCA ACGCCCTCGG CCCATGGGCT GAAAACGTTC CGGTCGAGAT CCTGCGCAAA GGCATGCGCG CCATGCTCAA GACCCGGATC TACGACAACC GCATGGTGGT TGCCCAGCGT CAGAAAAAAA TGTCGTTCTA CATGCAGAGC CTTGGCGAAG AAGCCATTGG CAGTGCCCAG GCCCTGGCCT TGAACATCGA CGACATGTGC TTCCCCACCT ACCGCCAGCA AAGCATTCTG ATGGCCCGCG ACGTACCGCT GGTCGACCTG ATCTGCCAGT TGCTGTCCAA CGAGCGCGAT CCACTCAAGG GACGTCAGCT GCCGATCATG TACTCGGTCA AGGACGCCGG TTTCTTCACC ATTTCCGGTA ACCTCGCCAC CCAGTTCATT CAGGGCGTGG GCTGGGGCAT GGCCTCGGCG ATCAAAGGCG ACACCAAAAT CGCCTCGGCC TGGATCGGCG ACGGCGCCAC CGCCGAATCG GACTTCCACA CCGCCCTCAC CTTCGCTCAC GTCTATCGTG CGCCGGTGAT CCTCAACGTG GTCAACAACC AGTGGGCGAT CTCGACCTTC CAGGCCATCG CCGGTGGTGA AGCCACCACC TTCGCCGGAC GCGGTGTCGG TTGCGGCATC GCCTCGCTGC GGGTGGATGG CAACGATTTT TACGCGGTCT ACGCCGCCTC CGCCTGGGCT GCCGAACGCG CCCGCCGCAA CCTCGGCCCG ACCATGATCG AATGGGTCAC CTACCGCGCC GGCCCGCACT CGACCTCCGA CGATCCGTCC AAATACCGTC CTGCCGACGA CTGGAGCCAC TTCCCGCTGG GCGACCCGAT TGCCCGCCTG AAACAGCACC TGATCAAAGT CGGCCACTGG TCGGAAGAAG AGCACGCCGC CGTCAGCGCC GAGCTCGAAG CCGAAGTGAT CGCCGCACAG AAACAGGCCG AACAGTACGG CACCCTCGCC GGCGGCCAGA TTCCGAGCGC CGCCACCATG TTCGAAGACG TCTACAAAGA GATGCCGGAG CACTTGAAGC GCCAGCGTCA GCAGTTGGGG ATCTGA
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Protein sequence | MTQAYEPLRL HVPEPSGRPG CKTDFSYLHL TDAGTVRKPS IDVEPADTAD LARGLIRVLD DQGNALGPWA ENVPVEILRK GMRAMLKTRI YDNRMVVAQR QKKMSFYMQS LGEEAIGSAQ ALALNIDDMC FPTYRQQSIL MARDVPLVDL ICQLLSNERD PLKGRQLPIM YSVKDAGFFT ISGNLATQFI QGVGWGMASA IKGDTKIASA WIGDGATAES DFHTALTFAH VYRAPVILNV VNNQWAISTF QAIAGGEATT FAGRGVGCGI ASLRVDGNDF YAVYAASAWA AERARRNLGP TMIEWVTYRA GPHSTSDDPS KYRPADDWSH FPLGDPIARL KQHLIKVGHW SEEEHAAVSA ELEAEVIAAQ KQAEQYGTLA GGQIPSAATM FEDVYKEMPE HLKRQRQQLG I
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