Gene Pfl01_3462 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3462 
Symbol 
ID3713587 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3946653 
End bp3947141 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content59% 
IMG OID 
ProductAsnC family transcriptional regulator 
Protein accessionYP_349191 
Protein GI77459684 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.112426 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCAAAC TGGACCGTAC CGACATCGGC ATTCTCAACA GCCTTCAGGA GAACGCGCGC 
ATCACCAACG CCGACCTTGC CCGTTCGGTC AATCTGTCGC CGACGCCGTG CTTCAACCGG
GTCAAGGCGA TGGAAGAGCT GGGGCTGATC CGCGAGCAGG TGACGCTGCT GGATGCAGAC
CTGCTGGGCC TGCACGTCAA CGTGTTCATC CACGTCAGTC TCGAGAAGCA GGTAGAGGAA
GCGCTGCAGC ATTTCGAAGA AGCCATTTCC GATCGTCCCG AAGTCATGGA GTGCTACCTG
ATGGCCGGCG ACCCTGACTA CTTGATCCGG GTGCTGGTGC CGACCATTCA GTCGCTCGAA
CGCTTCATGA TGGACTTTCT GACCAAGGTG CCGGGCGTGG CCAACATTCG GTCAAGTTTT
GCGCTCAAGC AGGTGCGCTA TAAGACGGCA TTGCCGCTGC CGGCGAACGG TTTGACGCTG
GGCAACTGA
 
Protein sequence
MRKLDRTDIG ILNSLQENAR ITNADLARSV NLSPTPCFNR VKAMEELGLI REQVTLLDAD 
LLGLHVNVFI HVSLEKQVEE ALQHFEEAIS DRPEVMECYL MAGDPDYLIR VLVPTIQSLE
RFMMDFLTKV PGVANIRSSF ALKQVRYKTA LPLPANGLTL GN