Gene Pfl01_3460 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3460 
Symbol 
ID3713585 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3944804 
End bp3945667 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content61% 
IMG OID 
ProductBeta-lactamase-like 
Protein accessionYP_349189 
Protein GI77459682 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.127719 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGCGC TGATTGAAGC TTTCCTCGAC CCCGCCTCTT CGACCTACAG CTATGTGGTC 
TACGAGGCCG ATGGCGGGCA ATGCGCAATC GTCGATCCGG TGCTCGATTA CGACGGGGCC
GCCGGCCGCA CCTGCACGGC TCAGGCCGAC AGGATCATCG CCTTCGTGCA TGCCCATCAC
TTGCAAGTGC AATGGCTGCT GGAAACCCAT GCCCACGCCG ACCACCTGTC CGCCGCGCCC
TACCTGCGCC GGGAACTGGG CGGGAAAATC GCCATTGGCG AATCGATCAG CAAAGTGCAG
AACGTGTTCA AGGCGCTGTT CAACCTGGAA CCGGAATTTC GCGTCGACGG CTCGCAGTTC
GATCATCTGT TCGCGCCGAA CGAGTCGTTC CGGATCGGCA ATCTCAAGGC CACCGCCCTG
CATGTCCCCG GCCACACCCC GGCGGACATG GCCTACTTGA TCGACGGCGA ACAGATCCTG
GTCGGCGACA CGCTGTTCAT GCCCGACGTC GGCACCGCCC GTTGCGACTT CCCAGGTGGC
AACGCCCATC AGTTGTTCAA TTCGATTCAC AAGCTGCTGG CCTTCCCTGC CAGCGTGAAG
CTCTATGTCT GCCACGACTA TCCGCCGCAA GGCCGCGACT CGCAGTGCCA GACCACCGTG
GGTGAACAGC GCAAAAGCAA TATCCATGTG CATGACGGCG TCGATGAGGC CGCGTTTGTC
GAGATGCGTA CCAAACGGGA TGCCGGACTT GGAATGCCGA CACTGTTGTT GCCGGCGATT
CAGGTGAATG TGCGGGCGGG AAATCTGCCA CCGGCGGAAG GCAATGGCGT TGTTTACCTG
AAGATCCCTA TCAACTCCGT GTAA
 
Protein sequence
MPALIEAFLD PASSTYSYVV YEADGGQCAI VDPVLDYDGA AGRTCTAQAD RIIAFVHAHH 
LQVQWLLETH AHADHLSAAP YLRRELGGKI AIGESISKVQ NVFKALFNLE PEFRVDGSQF
DHLFAPNESF RIGNLKATAL HVPGHTPADM AYLIDGEQIL VGDTLFMPDV GTARCDFPGG
NAHQLFNSIH KLLAFPASVK LYVCHDYPPQ GRDSQCQTTV GEQRKSNIHV HDGVDEAAFV
EMRTKRDAGL GMPTLLLPAI QVNVRAGNLP PAEGNGVVYL KIPINSV