Gene Pfl01_3452 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3452 
Symbol 
ID3713577 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3937550 
End bp3938374 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content63% 
IMG OID 
ProductNAD-dependent epimerase/dehydratase 
Protein accessionYP_349181 
Protein GI77459674 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.212771 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGTCCA CCTCCACCGC CCCAACTCCG TTCAATCGCC TGCTGCTGAC CGGCGCCGCC 
GGTGGCCTGG GCAAAGTCTT GCGCGAACGT CTGCGCCCCT ACGCCAATGT GTTGCGCTTG
TCGGACATCG CCGCCCTCGC CCCGGCCATC GATGACCGGG AAGAAGTCGT GCTCTGCGAC
CTCGCCGACA AAGCTGCCGT GCATCAGCTG GTCGAAGGCG TGGATGCGAT CCTGCACTTC
GGTGGCGTCT CGGTGGAGCG CCCCTTCGAA GAAATCCTCG GCGCCAACAT CTGCGGCGTA
TTCCATATCT ATGAAGCGGC ACGCCGCCAC GGCGTCAAAC GGGTGATCTT CGCCAGCTCC
AACCATGTCA TCGGCTTCTA CAAACAGGAC GAACACCTCG ACGCCAGCTC CGCTCGCCGC
CCCGACGGCT ACTACGGTCT GTCCAAGTCC TACGGCGAAG ACATGGCCAG TTTCTACTTC
GATCGCTATG GCATCGAAAC TGTCAGCATC CGCATCGGCT CGTCGTTTCC CGAACCACAG
AACCGCCGAA TGATGCACAC CTGGCTGAGC TTCGACGACC TCACCCAATT GCTCGAACGT
TCGCTGTACA CCCCCAACGT CGGCCACACC GTGGTTTATG GCATGTCCGC CAACAAGGAC
GTGTGGTGGG ACAACCGCTT CGCCAGCCAC CTCGGCTTCG AGGCCAAAGA CACCTCCGAA
GTGTTTCGAG ACAAGGTCGA AGCGCAGCCG GTGCCCGCCA GCGATGACCC GGCGCGGATC
TATCAGGGCG GGGCCTTCGT TGCGGCCGGC CCGTTCGGCG ATTGA
 
Protein sequence
MTSTSTAPTP FNRLLLTGAA GGLGKVLRER LRPYANVLRL SDIAALAPAI DDREEVVLCD 
LADKAAVHQL VEGVDAILHF GGVSVERPFE EILGANICGV FHIYEAARRH GVKRVIFASS
NHVIGFYKQD EHLDASSARR PDGYYGLSKS YGEDMASFYF DRYGIETVSI RIGSSFPEPQ
NRRMMHTWLS FDDLTQLLER SLYTPNVGHT VVYGMSANKD VWWDNRFASH LGFEAKDTSE
VFRDKVEAQP VPASDDPARI YQGGAFVAAG PFGD