Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_3452 |
Symbol | |
ID | 3713577 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 3937550 |
End bp | 3938374 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | |
Product | NAD-dependent epimerase/dehydratase |
Protein accession | YP_349181 |
Protein GI | 77459674 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.212771 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGTCCA CCTCCACCGC CCCAACTCCG TTCAATCGCC TGCTGCTGAC CGGCGCCGCC GGTGGCCTGG GCAAAGTCTT GCGCGAACGT CTGCGCCCCT ACGCCAATGT GTTGCGCTTG TCGGACATCG CCGCCCTCGC CCCGGCCATC GATGACCGGG AAGAAGTCGT GCTCTGCGAC CTCGCCGACA AAGCTGCCGT GCATCAGCTG GTCGAAGGCG TGGATGCGAT CCTGCACTTC GGTGGCGTCT CGGTGGAGCG CCCCTTCGAA GAAATCCTCG GCGCCAACAT CTGCGGCGTA TTCCATATCT ATGAAGCGGC ACGCCGCCAC GGCGTCAAAC GGGTGATCTT CGCCAGCTCC AACCATGTCA TCGGCTTCTA CAAACAGGAC GAACACCTCG ACGCCAGCTC CGCTCGCCGC CCCGACGGCT ACTACGGTCT GTCCAAGTCC TACGGCGAAG ACATGGCCAG TTTCTACTTC GATCGCTATG GCATCGAAAC TGTCAGCATC CGCATCGGCT CGTCGTTTCC CGAACCACAG AACCGCCGAA TGATGCACAC CTGGCTGAGC TTCGACGACC TCACCCAATT GCTCGAACGT TCGCTGTACA CCCCCAACGT CGGCCACACC GTGGTTTATG GCATGTCCGC CAACAAGGAC GTGTGGTGGG ACAACCGCTT CGCCAGCCAC CTCGGCTTCG AGGCCAAAGA CACCTCCGAA GTGTTTCGAG ACAAGGTCGA AGCGCAGCCG GTGCCCGCCA GCGATGACCC GGCGCGGATC TATCAGGGCG GGGCCTTCGT TGCGGCCGGC CCGTTCGGCG ATTGA
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Protein sequence | MTSTSTAPTP FNRLLLTGAA GGLGKVLRER LRPYANVLRL SDIAALAPAI DDREEVVLCD LADKAAVHQL VEGVDAILHF GGVSVERPFE EILGANICGV FHIYEAARRH GVKRVIFASS NHVIGFYKQD EHLDASSARR PDGYYGLSKS YGEDMASFYF DRYGIETVSI RIGSSFPEPQ NRRMMHTWLS FDDLTQLLER SLYTPNVGHT VVYGMSANKD VWWDNRFASH LGFEAKDTSE VFRDKVEAQP VPASDDPARI YQGGAFVAAG PFGD
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