Gene Pfl01_3442 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3442 
Symbol 
ID3713450 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3926446 
End bp3927891 
Gene Length1446 bp 
Protein Length481 aa 
Translation table11 
GC content64% 
IMG OID 
Productputative oxidoreductase 
Protein accessionYP_349171 
Protein GI77459664 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.27561 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGCCAG TTCAGACACC ACAAAAAACC ACTGCCCGAC AGAGGCAGAA AACCTCAATT 
AACCGTGAGG CAAAAACCGT GATCGAGACC CTGAACCATC TCCCGCACCC GCAAGAAAGT
GCGGCCGCCC TCGCCGGCCA TTTCACCGAT CTGGCGCCAC CGCTCAACGA CCGTCAGGCG
CATCTGGAAG CCTCGCGCTG CCTGTATTGC TACGACGCGC CGTGCGTGAA TGCATGCCCG
AGCGAGATCG ACATTCCGTC GTTCATCCGC AATATCCATC AGGACAACGT GCCCGGCGCG
GCGCAGAAAA TCCTCTCGGC GAACATCCTC GGCGGCAGTT GCGCGCGGGT CTGTCCGACC
GAAATCCTCT GCCAGCAAGC CTGCGTGCGC AACAACGCCC ACGAATGCGC ACCGGTACTG
ATCGGCCTGC TGCAGCGCTA CGCCGTGGAC AACGCGAACT TTACCGAGCA TCCGTTCCAG
CGCGCCGCCG CAACCGGCAA ACGCATCGCG GTGGTCGGTG CCGGCCCGGC GGGTTTGTCC
TGCGCGCATC GCAGCGCCAT GCACGGTCAC GAGGTGGTGA TTTTCGAAGC ACGGGAGAAG
GCTGGCGGGC TCAACGAATA CGGGATCGCC AAATACAAAC TGGTGGATGA CTACGCGCAG
AAGGAGCTGG ATTTCCTCCT GCAGATCGGC GGCATCGAAA TCCGTCACGG CCAGAAACTC
GGTGAGAATC TGACCCTCAG CGAACTGCAT CAACAGTTCG ACGCGGTGTT CCTCGGCCTC
GGCCTGAACG CGAGCAAGCA ACTCGGCCTG CCCCACGAAG ACGCCCCCGG CCTGCTCGCC
GCCACCGACT ACATCCGCGA ACTGCGCCAG GCCGATGACC TGTCGCAACT GCCGCTGGCC
GAACGTTGCA TCGTCCTCGG TGCCGGCAAT ACCGCCATCG ACATGGCCGT GCAAATGGCC
CGCCTCGGCG CCCGCGACGT CAATCTGGTC TATCGCCGTG GCGCGGCAGA CATGGGCGCC
ACCGGCCATG AGCAGGACAT CGCCAAGGCC AATCAGGTGC GGTTGCTGAC ATGGGCGCAA
CCGGACGAAG TGCTGCTCGA CGCGCAAGGC AAGGTTCGTG GCATGCGTTT CGCCCGTACG
CATCTGGTGG ACGGTCGCCT GCAAACCACG GGCGAGACTT TCGAGCTGGC CGCCGATGCG
ATCTTCAAAG CCATCGGCCA GGCCTTCGAC GGCAGCGCCC TCGCCGACCC GCTGGCCCGC
GAACTCAAGC GTCAGGGCGA ACGCATCCAG GTCGATGAAA ACCTGCGCAC CAGCATCCCC
GGCGTGTACG CAGGCGGCGA CTGCACCAGC CTCGATCAGG ACCTGACCGT GCAAGCGGTG
CAACACGGCA AGCGCGCCGC CGAGGCGATC AACGCTCAAC TGATGCTCAA CGTGGAGGCT
GCGTAA
 
Protein sequence
MRPVQTPQKT TARQRQKTSI NREAKTVIET LNHLPHPQES AAALAGHFTD LAPPLNDRQA 
HLEASRCLYC YDAPCVNACP SEIDIPSFIR NIHQDNVPGA AQKILSANIL GGSCARVCPT
EILCQQACVR NNAHECAPVL IGLLQRYAVD NANFTEHPFQ RAAATGKRIA VVGAGPAGLS
CAHRSAMHGH EVVIFEAREK AGGLNEYGIA KYKLVDDYAQ KELDFLLQIG GIEIRHGQKL
GENLTLSELH QQFDAVFLGL GLNASKQLGL PHEDAPGLLA ATDYIRELRQ ADDLSQLPLA
ERCIVLGAGN TAIDMAVQMA RLGARDVNLV YRRGAADMGA TGHEQDIAKA NQVRLLTWAQ
PDEVLLDAQG KVRGMRFART HLVDGRLQTT GETFELAADA IFKAIGQAFD GSALADPLAR
ELKRQGERIQ VDENLRTSIP GVYAGGDCTS LDQDLTVQAV QHGKRAAEAI NAQLMLNVEA
A