Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_3442 |
Symbol | |
ID | 3713450 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 3926446 |
End bp | 3927891 |
Gene Length | 1446 bp |
Protein Length | 481 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | |
Product | putative oxidoreductase |
Protein accession | YP_349171 |
Protein GI | 77459664 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.27561 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGGCCAG TTCAGACACC ACAAAAAACC ACTGCCCGAC AGAGGCAGAA AACCTCAATT AACCGTGAGG CAAAAACCGT GATCGAGACC CTGAACCATC TCCCGCACCC GCAAGAAAGT GCGGCCGCCC TCGCCGGCCA TTTCACCGAT CTGGCGCCAC CGCTCAACGA CCGTCAGGCG CATCTGGAAG CCTCGCGCTG CCTGTATTGC TACGACGCGC CGTGCGTGAA TGCATGCCCG AGCGAGATCG ACATTCCGTC GTTCATCCGC AATATCCATC AGGACAACGT GCCCGGCGCG GCGCAGAAAA TCCTCTCGGC GAACATCCTC GGCGGCAGTT GCGCGCGGGT CTGTCCGACC GAAATCCTCT GCCAGCAAGC CTGCGTGCGC AACAACGCCC ACGAATGCGC ACCGGTACTG ATCGGCCTGC TGCAGCGCTA CGCCGTGGAC AACGCGAACT TTACCGAGCA TCCGTTCCAG CGCGCCGCCG CAACCGGCAA ACGCATCGCG GTGGTCGGTG CCGGCCCGGC GGGTTTGTCC TGCGCGCATC GCAGCGCCAT GCACGGTCAC GAGGTGGTGA TTTTCGAAGC ACGGGAGAAG GCTGGCGGGC TCAACGAATA CGGGATCGCC AAATACAAAC TGGTGGATGA CTACGCGCAG AAGGAGCTGG ATTTCCTCCT GCAGATCGGC GGCATCGAAA TCCGTCACGG CCAGAAACTC GGTGAGAATC TGACCCTCAG CGAACTGCAT CAACAGTTCG ACGCGGTGTT CCTCGGCCTC GGCCTGAACG CGAGCAAGCA ACTCGGCCTG CCCCACGAAG ACGCCCCCGG CCTGCTCGCC GCCACCGACT ACATCCGCGA ACTGCGCCAG GCCGATGACC TGTCGCAACT GCCGCTGGCC GAACGTTGCA TCGTCCTCGG TGCCGGCAAT ACCGCCATCG ACATGGCCGT GCAAATGGCC CGCCTCGGCG CCCGCGACGT CAATCTGGTC TATCGCCGTG GCGCGGCAGA CATGGGCGCC ACCGGCCATG AGCAGGACAT CGCCAAGGCC AATCAGGTGC GGTTGCTGAC ATGGGCGCAA CCGGACGAAG TGCTGCTCGA CGCGCAAGGC AAGGTTCGTG GCATGCGTTT CGCCCGTACG CATCTGGTGG ACGGTCGCCT GCAAACCACG GGCGAGACTT TCGAGCTGGC CGCCGATGCG ATCTTCAAAG CCATCGGCCA GGCCTTCGAC GGCAGCGCCC TCGCCGACCC GCTGGCCCGC GAACTCAAGC GTCAGGGCGA ACGCATCCAG GTCGATGAAA ACCTGCGCAC CAGCATCCCC GGCGTGTACG CAGGCGGCGA CTGCACCAGC CTCGATCAGG ACCTGACCGT GCAAGCGGTG CAACACGGCA AGCGCGCCGC CGAGGCGATC AACGCTCAAC TGATGCTCAA CGTGGAGGCT GCGTAA
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Protein sequence | MRPVQTPQKT TARQRQKTSI NREAKTVIET LNHLPHPQES AAALAGHFTD LAPPLNDRQA HLEASRCLYC YDAPCVNACP SEIDIPSFIR NIHQDNVPGA AQKILSANIL GGSCARVCPT EILCQQACVR NNAHECAPVL IGLLQRYAVD NANFTEHPFQ RAAATGKRIA VVGAGPAGLS CAHRSAMHGH EVVIFEAREK AGGLNEYGIA KYKLVDDYAQ KELDFLLQIG GIEIRHGQKL GENLTLSELH QQFDAVFLGL GLNASKQLGL PHEDAPGLLA ATDYIRELRQ ADDLSQLPLA ERCIVLGAGN TAIDMAVQMA RLGARDVNLV YRRGAADMGA TGHEQDIAKA NQVRLLTWAQ PDEVLLDAQG KVRGMRFART HLVDGRLQTT GETFELAADA IFKAIGQAFD GSALADPLAR ELKRQGERIQ VDENLRTSIP GVYAGGDCTS LDQDLTVQAV QHGKRAAEAI NAQLMLNVEA A
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