Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_3435 |
Symbol | |
ID | 3713443 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 3917648 |
End bp | 3919075 |
Gene Length | 1428 bp |
Protein Length | 475 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | |
Product | phosphodiesterase/alkaline phosphatase D-like |
Protein accession | YP_349164 |
Protein GI | 77459657 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.45907 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.49762 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACGATCA CATTGGGCCC GATCATCGGG CACACCACGG ACACGTCGGC TAAAATCTGG ATACGCGGGG AAGCTAATGA TGACAAGGAG GCGAAGCGGT TTTGTGTCGG CCTGATCGAT GTATTCAAGG GCAAGACCTG GGTCACGTCG TGCCGCTGTT TCCTGCGTGA CTACTATGAC TTCACCGGTG CGGTAGAACT CAGTGAACTG AAACCCGCCA CGGCCTATCG CGTGGTCTGC AACACGACCT ACGTCAGCGA TGAACTGGAG GTCACCCGAC TGGTCAGGGA CGACAAACCC GTCCGCCCGC TCAACCGTGC GGAAGAATCC GTCGAAGGGA CGTTCACCAC CGACCGGGCA CCCGCTGACG GCACGCTGAA CTTTGTATTC GGCTCGTGCC GTTATCTGTA CTGGGACAAC GTCTTTCAGA GTGATGCGGA AAAAGGCGAC AAGACATTCC GCTCGATTGT CGAAAAACAT TCGCAGAAAC CTTTCGACCT GACGCTGATG ATCGGCGACC AGGTGTATCT CGATCCGCTG AATGCGCTGC GCCAGTACAG CACGCTTGAA GAAATGTTCG ACATCTATCG TCAGGCCTTC GGCCTGCCCT GGATCCGGCA GATGATGAAC CGGATCCCGA CCTACATGAT CCTTGACGAT CACGAGATCC GCGACGACTG GTCGCGAGAG AAACTCGACG ATGTCGGCAA AGGCTTTTAC GTCAGTGCGA TGCGTGGTTA TGAGTCCTAC CAGCATTTGC ACAACCCGGC GACGCCCAAG GGCCAGTACT GGTACACCTT CCAGAAAGGT GCCTTTCCGT TTTTCGTGAT GGACACCCGA ACCCAGCGTA TCCGTGAGCC GTCGTCGATC GAACCGCGCT CGGTGCTGGG GCGCGAACAG CTCAATGCGT TCCTGACGTG GCTGAGTGAG CATCGGGGGG CGCCGATGAT CTTTGTGGTC TCGAGCGTGC CGTTCTTCCC CGATCCGAAA TCCGGAGACG ACAAGTGGGT GGGCTTTCCG GAGGAGCGCA GCATCATTCT GGAGTTCATC CGGGTCGAGA AGATCAGCAA TGTCGTCGTG TTGTCCGGCG ACGTGCACAA CAGCTGCTTC GCCGGCATGC GTTGCTACCA GGACCCGACG TTCGGGCTGA CCTCACTGGT CGCCTCGCCC TTCTACTGGC CCTATCCCCA TGAAAATCGC AGCAACTTCT ACGGCGGCCG GACACTCGAG TTCATGCAGT GGAGCGATGG CACCCGCCGC ATGCGCGACC GCATAGAGTA TCGCTACGAA GGCGAAGGCT TTATCGGTGA AGAGAGCTTT GTCACCGTTT CGGTAGACGC GAGCAGGAAA GGCAAGATCG GCCAGGCACG CATCTATGAC CGCAAGGGCG AGCCGCAGGA AGACTACCCC GGCGTCTTCA AGTTCTAG
|
Protein sequence | MTITLGPIIG HTTDTSAKIW IRGEANDDKE AKRFCVGLID VFKGKTWVTS CRCFLRDYYD FTGAVELSEL KPATAYRVVC NTTYVSDELE VTRLVRDDKP VRPLNRAEES VEGTFTTDRA PADGTLNFVF GSCRYLYWDN VFQSDAEKGD KTFRSIVEKH SQKPFDLTLM IGDQVYLDPL NALRQYSTLE EMFDIYRQAF GLPWIRQMMN RIPTYMILDD HEIRDDWSRE KLDDVGKGFY VSAMRGYESY QHLHNPATPK GQYWYTFQKG AFPFFVMDTR TQRIREPSSI EPRSVLGREQ LNAFLTWLSE HRGAPMIFVV SSVPFFPDPK SGDDKWVGFP EERSIILEFI RVEKISNVVV LSGDVHNSCF AGMRCYQDPT FGLTSLVASP FYWPYPHENR SNFYGGRTLE FMQWSDGTRR MRDRIEYRYE GEGFIGEESF VTVSVDASRK GKIGQARIYD RKGEPQEDYP GVFKF
|
| |