| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_3424 |
|---|
| Symbol | |
|---|
| ID | 3713432 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | - |
|---|
| Start bp | 3904428 |
|---|
| End bp | 3905318 |
|---|
| Gene Length | 891 bp |
|---|
| Protein Length | 296 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_349153 |
|---|
| Protein GI | 77459646 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACCTGC GTTTGCTGCG GTACTTCATG GCCCTGGCCG ATGAGCTGCA CTTTGGCCGC
GCCGCCGAAC GGCTGCACAT CTGCCAGCCG CCGCTGAGCC AGCAGATCCG TTTGCTGGAG
GAAGAACTCG GCACGCCGCT GTTCGAGCGC AGCCATCACC GGGTCGAGCT GACAGCGGCG
GGGCAGATGC TCAAAGAGCA GGCGCCGCTG GTGTTCGAGC AACTCGAGCG GGCGCTGGAC
CTGACCCGCC AGACCGGGCG CGGGCAACTC GGCGAGCTGG AAATCGGCAT GATCAGTTCG
GTGATGGTCG GCGTGCTGCC CAAGGCGCTG CACCTGTTTC GCGAGCGCTA TCCACAGGTG
ACCTGGCGTC TGCATGAGAT GACCCCGGCG GCGCAGGTCA AGGCGTTGAA GGAAAAACGC
ATCGACGCCT GCGTATTCCG CGTCGGCTAT GACGACCCGC AGTTGCGCAA TGAATTGCTG
ATCCATGAGC CGATCCATGT GGTAATGCCG CAGGATCATC CGCTGGCCCG GCGCGAGGTG
CTGGCGCCCG CAGACCTCGC GCAGGAACCG TTCGTGGCGC TGGAATTGAA GCAGTCGCGG
TTCGCCAATT TTCTCTATCA GTGCTGCATT CAGGCCGGGT TCACCCCGCA GATCCGCCAG
CAGGTGATCG AGGTGCAGAC CTTGCTCAGT CTGGTTCGCG CCGGGTTTGG CGTGGCGCTG
TTACCCGCAT CGATCGAGCA GTTGGCTCCC GCGGGACTGG TGTTCCGGCG CCTGACCCCG
GCGTTGCCGC AAGTGCCGCT GTACGCGACG TATCGGGCCG ACGATGCCTC GCCGGTGCTC
AAGCTGTTTC TCGATACGCT GCGCGAGCTG GTCGATCACT CATCGCGGTA A
|
|---|
| Protein sequence | MDLRLLRYFM ALADELHFGR AAERLHICQP PLSQQIRLLE EELGTPLFER SHHRVELTAA
GQMLKEQAPL VFEQLERALD LTRQTGRGQL GELEIGMISS VMVGVLPKAL HLFRERYPQV
TWRLHEMTPA AQVKALKEKR IDACVFRVGY DDPQLRNELL IHEPIHVVMP QDHPLARREV
LAPADLAQEP FVALELKQSR FANFLYQCCI QAGFTPQIRQ QVIEVQTLLS LVRAGFGVAL
LPASIEQLAP AGLVFRRLTP ALPQVPLYAT YRADDASPVL KLFLDTLREL VDHSSR
|
|---|
| |