| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_3418 |
|---|
| Symbol | |
|---|
| ID | 3713426 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | + |
|---|
| Start bp | 3898956 |
|---|
| End bp | 3900023 |
|---|
| Gene Length | 1068 bp |
|---|
| Protein Length | 355 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | |
|---|
| Product | aminoglycoside phosphotransferase |
|---|
| Protein accession | YP_349147 |
|---|
| Protein GI | 77459640 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 0.949755 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCTTA CTGACCAGTC CACCCGTATC CGCTCTGGCG AAGAACTCGA TGCCAGCCTG
ATCGATCCGT ACCTCAAGGC GCACATTCCG GGCCTGACCG GCACGCCGCA GATCAGCCAG
TTTCCCGGCG GCGCGTCGAA CCTGACCTAC CTGCTGGAAT ACCCGGACCA GGAATTTGTC
CTGCGCCGTC CGCCGTTCGG CCACAAGGCC AAGTCCGCCC ACGACATGGG CCGCGAATTC
CGCATCCTCA ACCAGTTGCG CGACGGTTTC CCGTATTGCC CGAAAGCCTA CGTGCACTGC
ACCGATGAAT CAGTGATCGG TGCCGAGTTC TATGTGATGG AACGGGTCAG GGGCATCATC
CTGCGCTCGG ACCTGCCGCC GGAACTGGGC CTCGACCAGG CCAAAACCGA AGCCCTGTGC
AAGAGCTTCA TCGACCGTTT CGTCGAGCTG CATCGGGTCG ACTACAAAGC CTGCGGCCTC
GGCGATCTGG GCAAACCGGA AGGCTACGTC GCCCGCCAGA TCAAAGGCTG GAGCGAACGC
TACGAAAAAG CCCTGACCCC GGACGCGCCG CACTGGGAAC AGGTCAAAGC CTGGCTCAAC
GACAAGATGC CGGCCGACCA CCCGACCTCC AGCATCGTCC ACAACGACTA TCGCTTCGAC
AACGTCATCC TCGACCCGAG CAACCCGATG CAGATCATCG GCGTGCTCGA CTGGGAACTG
ACTACCCTTG GCGATCCATT GATGGACCTG GGCAACACCC TCGCCTACTG GATCCAGGCC
GACGACCCGG CCCCGGTGCA ACTGATGCGC CGCCAGCCAA GCCACGCCCC GGGCATGCTG
ACGCGCCGCG AATTCGTCGA TTACTACGCC GAGCGTTCGG GCATCCAGAT CGACAATTTC
GACTTCTACT ACACCTACGG CCTGTTCCGC CTGGCCGGCA TCGTGCAGCA GATTTACTAC
CGCTTCTTCC ATGGCCAGAC CCAGGACAAA CGCTTCGCGC AGTTCATTCA CATGAACAAA
CTGCTGGAGC AGATGAGCCT GCAGGTCATT GCCAAATCCA GCCTCTGA
|
|---|
| Protein sequence | MALTDQSTRI RSGEELDASL IDPYLKAHIP GLTGTPQISQ FPGGASNLTY LLEYPDQEFV
LRRPPFGHKA KSAHDMGREF RILNQLRDGF PYCPKAYVHC TDESVIGAEF YVMERVRGII
LRSDLPPELG LDQAKTEALC KSFIDRFVEL HRVDYKACGL GDLGKPEGYV ARQIKGWSER
YEKALTPDAP HWEQVKAWLN DKMPADHPTS SIVHNDYRFD NVILDPSNPM QIIGVLDWEL
TTLGDPLMDL GNTLAYWIQA DDPAPVQLMR RQPSHAPGML TRREFVDYYA ERSGIQIDNF
DFYYTYGLFR LAGIVQQIYY RFFHGQTQDK RFAQFIHMNK LLEQMSLQVI AKSSL
|
|---|
| |