| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_3415 |
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| Symbol | |
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| ID | 3713423 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas fluorescens Pf0-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007492 |
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| Strand | + |
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| Start bp | 3895804 |
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| End bp | 3897813 |
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| Gene Length | 2010 bp |
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| Protein Length | 669 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | |
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| Product | Rhs element Vgr protein |
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| Protein accession | YP_349144 |
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| Protein GI | 77459637 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.960838 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCGCT CCACCGACAG CACCACCACC CTCTCCCTCA CCGCCACTTC GCTGTCGGCG
CTTTACCCTG AGTCGCTGTC GGGTGATGAA GCGCTCAACG CACTAAGCGC ACAAATCCTC
AACGGACTCA ACGACGGTAC CTCCCTCACC CTGACCAGTG CCATCGCCAC CCACGTCACC
ACCACCCTGC ACAACGACGC CCAACTTCGC CCGTTCGACG CTCTGGTCGC CGAAATCCGC
CAGCTCCCCG CCGACGCGAC CGCCGAACGC TATAAGCTGG TTCTAAGGCC ATGGCTCTGG
TGGCTGACCC TGGCCAGCAA CAACCGGGTA TTCCAGAACC TCGTCACCTC GGACATCGTC
ACTTCGATCT TCAAAGCTCA CGGTTTCACC GATTTCAAAC TCTCACTGAC CGGCAGCTAC
ACCCCACGCG AATACTGCGT GCAGTACGGC GAAACCGATT TCGCCTTCGT CTCGCGCCTG
CTGGAGGAGG AAGGCATTTT CTGGTTCTTC ACCCACGAGG ACGGCAAGCA CACGCTGGTG
CTGGGTGATA GCAACGACGC CTTCGTGCAG ATCCCCAACG GGCCGAAGGT CAAATACCTG
GGCCAGCAAT TGGGTGAGCG CGAATTGCAT GGCATCCGCT CAGGCCAGGT GTGCCTGCAA
GCGGTGGCCG GCGTGTACAA GGCAACGGAT TACGAATTCA CCACACCAAC CACTTCACTC
TATGGCCAGG CCGAAGCCGT CGCCGGGCCG CGTTCGATCT ATGAGCATCC GGGTGGTTAC
AACGCCAAGG CTCGGGGCGA TGCATTGACC AAACAACGGG TAGACGGGCT TCGCAGTGAA
GAGAAACGCT TTGTTGGCGA AAGCGACTGC CGCTGGCTGA TTCCAGGCCA CTGGTTCACC
CTCGACGGCC ACGAAGACGC GAGCCTGAAC ATCGACTGGG TCGTCACTCG GGTGACCCAT
GACGCCAGCC ACGAAAGCTA TCGCAATCGC TTCGAGGCGA TCCCCAAGGC CACGCCGTTT
CGTCCGCAAC GCCTCACGCC CAAACCGCGC ATGCACCCGC AGACCGCCAT CGTAGTCGGC
AAGTCCGGCG AGGAAATCTG GACCGACGAA TACGGCCGGA TCAAGTTGCA GTTCCCGTGG
GATCGCGACG GCAAGAACGA TGAAACCAGT TCCTGCTGGG TGCGCGTGGT GCTGCCGTGG
AGCGGCAAGG GTTTCGGCAT GCAGTTCGTG CCGCGCATCG GTCAGGAGGT CATCGTCACC
TTCATCGACG GCGATCCGGA CCGGCCGCTG GTCACCGGGT GCGTCTACAA CGGCGATAAC
GCCCTGCCCT ATGCCTTGCC GGCGAACCAG ACACAGTCGG GGATCAAGAC TCAATCGTCC
AAGGGCGGCG GTGGGTTCAA CGAGCTGCGT TTCGAGGACA AGAAAGACGC CGAGGAAGTG
TTCCTGCAAG CGCAGAAAGA TCTGAAGATC AACGTGCTCA ACGACACCAC CGCCACCGTC
GGCCACGACG AAACCCTCAC GGTGCAGAAC GCCCGCACCC GTACGGTCAA GGACGGCGAT
GAAACCGTGA CGCTGGAGAA AGGCAAACGC AGCGTCACGA TCCAGACCGG CAGCGATAGC
CTCGATGTAA AGGACAGCCG CACAGTGAAA GTCGGCGCCG ACCAGAACCA CAGCACCGGC
GGCAACTACA CCGACAAGGT CACCGGCGAT TACAGCCTGA CGGTGGACGG CAACCTGACG
ATCAAGGTCA GCGGCACCCT CACCCTGCAA AGCGGCGGCA GTTTCACGAT CAAGAGCGGT
GCAGATCTGG CGACTTCGGC CAGCACTTCG ATCACCCAGA AGGCCGGCAC CGCCATGACC
AATCAGGCCG GTACTTCACT GGACAACAAA GCCGGGACGA CGCTGACCAA CGACGCCGGC
ATCAGCCTGA CCAACAAGGG CGCGGCCTCA CAGACCGTGG ACGGCGGCGG CATGCTGACC
ATCAAGGGCG GGCTGGTGCA GGTCAACTGA
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| Protein sequence | MPRSTDSTTT LSLTATSLSA LYPESLSGDE ALNALSAQIL NGLNDGTSLT LTSAIATHVT
TTLHNDAQLR PFDALVAEIR QLPADATAER YKLVLRPWLW WLTLASNNRV FQNLVTSDIV
TSIFKAHGFT DFKLSLTGSY TPREYCVQYG ETDFAFVSRL LEEEGIFWFF THEDGKHTLV
LGDSNDAFVQ IPNGPKVKYL GQQLGERELH GIRSGQVCLQ AVAGVYKATD YEFTTPTTSL
YGQAEAVAGP RSIYEHPGGY NAKARGDALT KQRVDGLRSE EKRFVGESDC RWLIPGHWFT
LDGHEDASLN IDWVVTRVTH DASHESYRNR FEAIPKATPF RPQRLTPKPR MHPQTAIVVG
KSGEEIWTDE YGRIKLQFPW DRDGKNDETS SCWVRVVLPW SGKGFGMQFV PRIGQEVIVT
FIDGDPDRPL VTGCVYNGDN ALPYALPANQ TQSGIKTQSS KGGGGFNELR FEDKKDAEEV
FLQAQKDLKI NVLNDTTATV GHDETLTVQN ARTRTVKDGD ETVTLEKGKR SVTIQTGSDS
LDVKDSRTVK VGADQNHSTG GNYTDKVTGD YSLTVDGNLT IKVSGTLTLQ SGGSFTIKSG
ADLATSASTS ITQKAGTAMT NQAGTSLDNK AGTTLTNDAG ISLTNKGAAS QTVDGGGMLT
IKGGLVQVN
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