Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_3414 |
Symbol | |
ID | 3713422 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 3894859 |
End bp | 3895743 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_349143 |
Protein GI | 77459636 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.00743869 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAATCA CTTTAGCCCC GCCCCTTGCG AATGAAGGAA GTTTCGAACT AAAACTTATC AACAAATCAC TGGCATACCT CATTAATGTC GGTAATGACC CAGGGGAACT GCACGAACTC AACACGCTAT ATTATGCGAA TCGCGGCAAC CTGTTCCTCG ACGCAAAACC ATGCACCATT ATTGATGAGC GAAACTTCAG CAGAGGTCGA TGGACGCCCA CCGCAGATTA TGGAAGCCTG AACATTCACG AACTCCGGGC GCACCTTCCC GCTGCGATGG CGCAAGATGC AAAGGTAAAA AATGGCGATA ACGAAATAGA CTTGATTGTT TCGTCCGACC AGCGTCTTGT CATCATTGAA TGCAAATCAG GTGACGCGTC CAGCAGTGGA TCGCAAACCA ATAGTTATGT TGAAACATTG CTGGAACGTG GCAACAATCA CAATCACAGT TATTTCGCGT ATTGTCATGA CTCAGCAAAA TCAGACAACC ATTATTTTTC TTTCTTTCAA AAAATCTTCA AGGCCATCTC TGAAACCAGG CCTAGCATTT ATAAAGACGC CACTGATTAC TTCAAAAAAT TCACCTATAC CGGAAAGCCA GAAGTGGATC TCGCCGTAAT TATCGACGAT TACGCGACAA CTAATAACAT CACCAAAACA TTGGATACGG ACTACGCCAA AGTCATTTTT CTGAATGAGA TACTCGACGA CAAAGCAGGT TTCAAACTCC ACTACTTTCA TGTCCCGACC GGTAGCAAGA GCAATATCAG AGACGCTACA GTCAAGCTCA TCAACAAAAA TTATCTGACA GCGACCGCCT ATGATGACAC CCGGGCATTC TGGCTAAAAC TCTATTTATA TTTGAAAGAC AACCCAGTCC GCTGA
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Protein sequence | MAITLAPPLA NEGSFELKLI NKSLAYLINV GNDPGELHEL NTLYYANRGN LFLDAKPCTI IDERNFSRGR WTPTADYGSL NIHELRAHLP AAMAQDAKVK NGDNEIDLIV SSDQRLVIIE CKSGDASSSG SQTNSYVETL LERGNNHNHS YFAYCHDSAK SDNHYFSFFQ KIFKAISETR PSIYKDATDY FKKFTYTGKP EVDLAVIIDD YATTNNITKT LDTDYAKVIF LNEILDDKAG FKLHYFHVPT GSKSNIRDAT VKLINKNYLT ATAYDDTRAF WLKLYLYLKD NPVR
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