Gene Pfl01_3414 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3414 
Symbol 
ID3713422 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3894859 
End bp3895743 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content45% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_349143 
Protein GI77459636 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.00743869 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAATCA CTTTAGCCCC GCCCCTTGCG AATGAAGGAA GTTTCGAACT AAAACTTATC 
AACAAATCAC TGGCATACCT CATTAATGTC GGTAATGACC CAGGGGAACT GCACGAACTC
AACACGCTAT ATTATGCGAA TCGCGGCAAC CTGTTCCTCG ACGCAAAACC ATGCACCATT
ATTGATGAGC GAAACTTCAG CAGAGGTCGA TGGACGCCCA CCGCAGATTA TGGAAGCCTG
AACATTCACG AACTCCGGGC GCACCTTCCC GCTGCGATGG CGCAAGATGC AAAGGTAAAA
AATGGCGATA ACGAAATAGA CTTGATTGTT TCGTCCGACC AGCGTCTTGT CATCATTGAA
TGCAAATCAG GTGACGCGTC CAGCAGTGGA TCGCAAACCA ATAGTTATGT TGAAACATTG
CTGGAACGTG GCAACAATCA CAATCACAGT TATTTCGCGT ATTGTCATGA CTCAGCAAAA
TCAGACAACC ATTATTTTTC TTTCTTTCAA AAAATCTTCA AGGCCATCTC TGAAACCAGG
CCTAGCATTT ATAAAGACGC CACTGATTAC TTCAAAAAAT TCACCTATAC CGGAAAGCCA
GAAGTGGATC TCGCCGTAAT TATCGACGAT TACGCGACAA CTAATAACAT CACCAAAACA
TTGGATACGG ACTACGCCAA AGTCATTTTT CTGAATGAGA TACTCGACGA CAAAGCAGGT
TTCAAACTCC ACTACTTTCA TGTCCCGACC GGTAGCAAGA GCAATATCAG AGACGCTACA
GTCAAGCTCA TCAACAAAAA TTATCTGACA GCGACCGCCT ATGATGACAC CCGGGCATTC
TGGCTAAAAC TCTATTTATA TTTGAAAGAC AACCCAGTCC GCTGA
 
Protein sequence
MAITLAPPLA NEGSFELKLI NKSLAYLINV GNDPGELHEL NTLYYANRGN LFLDAKPCTI 
IDERNFSRGR WTPTADYGSL NIHELRAHLP AAMAQDAKVK NGDNEIDLIV SSDQRLVIIE
CKSGDASSSG SQTNSYVETL LERGNNHNHS YFAYCHDSAK SDNHYFSFFQ KIFKAISETR
PSIYKDATDY FKKFTYTGKP EVDLAVIIDD YATTNNITKT LDTDYAKVIF LNEILDDKAG
FKLHYFHVPT GSKSNIRDAT VKLINKNYLT ATAYDDTRAF WLKLYLYLKD NPVR