Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_3412 |
Symbol | |
ID | 3713420 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 3891549 |
End bp | 3894089 |
Gene Length | 2541 bp |
Protein Length | 846 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | |
Product | ClpA/B-type protease |
Protein accession | YP_349141 |
Protein GI | 77459634 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.219119 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACTGG CCAGCCTGAT CGGACGCCTC AACCCGGACA ACCGCCGCGC CCTCGAACGT GCCGCGCAAC GGTGCTTGCA GCGCGGGCAT CACTTTGTCG AGATCGAGCA TCTGTTGCTG GAGTTGCTGG ATATCGAGGG CGGCGATTTT GCTTTTCTGC TGCCGCGCTT CGGGCTGGAG CGTGATGCGC TGACGGCGGA GATCAACAAG GCGCTGGACC TGTTCAAGAC CGGCAGCACG CGCACGCCAG CGCTGTCCTC GCACACGCTG GGATTGCTGG AAGACGCCGT GGTGCAGGCC AGTGTGCTGG GGATCGACAG CATTCGTTCC GGGCTGCTTT TATTGGCGTT GATCGACCGT GACGAGCGCC GCAGCCTGCT GCTCAACAGT GCATCGTCAT TGCTGCGAAT TCCGAAAGAA GCCTTGCGCG CAAACCTGCT GGAATGGACG GAAAACTCCC GTGAGCACGT TGGCCCGCGC TCTGTGTCTT CGGGGAGTCC AACGCCACGG CAAGACTCGG TGCTCGATCA ATACACCCAG GATCTGACCG CCGATGCTCA CGCCGGGCGC ATCGACCCGA TCGTCGGTCG CGATGGCGAA ATTCGCCAGT GCATCGACAT TCTTTTGAGG CGCCGGCAGA ACAACCCGAT TCTGGTCGGT GCGCCGGGCG TAGGCAAAAC CGCCGTGGTC GAGGGCCTGG CGCTACGCAT CGCCGCCGGG GATGTGCCGC CGTCGTTGCA GGAAGTCAGT TTGCGGGTGC TCGACCTTGG TTTGCTCCAG GCTGGGGCCG GGGTCAAAGG CGAATTCGAA CAGCGGCTCA AAGGTGTGAT TGACACGGTT CGCAGCGCCG ACAAGCCGAT CATCCTGTTC ATCGATGAGG CCCACACGCT GATCGGCGCT GGCGGTACCG AAGGTGGCAG CGATGCGGCC AACTTGCTCA AACCCGCGCT GGCCCGAGGT GAGTTGCGCA CGCTGGCCGC CACGACCTGG ATGGAATACA AAAAATATTT CGAGAAAGAC CCGGCCCTCG CCCGCCGCTT CCAGCTGGTG CAGGTGGAAG AGCCGGATGA AATCACCGCC GTGGAAATGC TCCGTGGCGT CGCCGCCAAA CTCGAACAGC ACCACGGCGT GCAAGTGCTG GATGCCGCGA TCCACGAAGC GGTGAAACTC TCGCATCGCT ATATCTCTGG CCGCCAGTTG CCGGACAAGG CCATCAGCGT CCTCGACACC GCCTGCGCCC GGGTTGCCCT CGGACAGCAC GACGTGCCGC CACCGCTGGA GAGCCTGCGC CACCGCCAGC AAAGCCTGAA AGAAGAAGTC GAACGCCTGC GCCGGGAACA GGCCACGGGG CTCGATCACC GCGAGCGCAT CACCCTGCTG GAAAGCGAAT CGAAGACCAA TGTCCAGGCC ATCCGCGAAC TGGAAACCCG TTGGAGTGAA GAGCGCGTCG CCGTGCGCGA ACTGCTCGAC ACCCGTCGCG AGTTACTGGC GCTGAGCGAA AGCGCCGACA GCGACAAGCC CGACGAAGCC ATCGACAGCC GCATCGATCA CCTCGCCGCC GAACTGCTGC GCCTGGAAGC CGGACTCGAT GCGATCCGCC AGGACGATCC GCTGGTACCC GAACAGGTCG ACGGCAAAAC CGTCGCCGCC GTGATCGCCG GCTGGACCGG CATCCCCGTC GGCAAAATGC TCGCCGACGA AGCCCATGCC GTGCGCACCC TCGGTACACG CATGGGCCAG CGCGTGATGG GCCAGAGCAC TGCGCTCAAC ACCATCGCCC AACGATTGCA GGCCTATCGT GCGGGTCTCA CCGATCCGCA AAAACCGGTT GGCGTGTTTC TGCTGGTCGG CCCCACGGGC GTTGGCAAAA CCGAAACCGC GTATGCACTG GCGGATGCCT TGTATGGCGG CGAACGCAAC CTGATCAGCA TCAACCTTTC CGAATATCAG GAAGCCCACA CCGTCAGCCA GCTCAAGGGC GCACCGCCCG GTTACGTCGG TTACGGAAGC GGCGGCGTGC TGACCGAGGC CGTTCGGCGC AAGCCGTATT CGGTGGTGTT GCTGGATGAA ATCGAGAAGG CGCATCCGGA TGTGCTGGAA GCGTTTTACA ACGTGTTCGA CAAGGGCTTG ATGGAAGACG GGACCGGGTT GGTGGTCGAC TTCAAAAACA CCGTGATGCT CGCCACCAGC AATGTCGGCG CCGAATTGCT GCTCGATACA CCGACTGCAC AACTCGGCTC GGAAGCGTTC AACGAGGCGC TGCACAAAGT CCTCCTGCAA GCCTTCCGCC CGGCGTTTCT GGCACGCATG ACGGTGGTCG CGTATCGGCC GCTGGATGAG CAGACGCTTG AAGGGATCGT GTTGGCGAAG CTGGAGAAAT TGCGCGGCCG TTACAAGGCT GCGACGGGCA AGCAGTTCGA GTTCGATTCG GGAATTGTGA AAGCGGTGCT CGCCAAATGC AGTGCGGCAG GCGCGCGGGA TGTCGAGAAC GTTTTGATGA CGCAGGTGAC AGGGAAATTG GCGGAGTGGG TGTTGGAATG A
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Protein sequence | MELASLIGRL NPDNRRALER AAQRCLQRGH HFVEIEHLLL ELLDIEGGDF AFLLPRFGLE RDALTAEINK ALDLFKTGST RTPALSSHTL GLLEDAVVQA SVLGIDSIRS GLLLLALIDR DERRSLLLNS ASSLLRIPKE ALRANLLEWT ENSREHVGPR SVSSGSPTPR QDSVLDQYTQ DLTADAHAGR IDPIVGRDGE IRQCIDILLR RRQNNPILVG APGVGKTAVV EGLALRIAAG DVPPSLQEVS LRVLDLGLLQ AGAGVKGEFE QRLKGVIDTV RSADKPIILF IDEAHTLIGA GGTEGGSDAA NLLKPALARG ELRTLAATTW MEYKKYFEKD PALARRFQLV QVEEPDEITA VEMLRGVAAK LEQHHGVQVL DAAIHEAVKL SHRYISGRQL PDKAISVLDT ACARVALGQH DVPPPLESLR HRQQSLKEEV ERLRREQATG LDHRERITLL ESESKTNVQA IRELETRWSE ERVAVRELLD TRRELLALSE SADSDKPDEA IDSRIDHLAA ELLRLEAGLD AIRQDDPLVP EQVDGKTVAA VIAGWTGIPV GKMLADEAHA VRTLGTRMGQ RVMGQSTALN TIAQRLQAYR AGLTDPQKPV GVFLLVGPTG VGKTETAYAL ADALYGGERN LISINLSEYQ EAHTVSQLKG APPGYVGYGS GGVLTEAVRR KPYSVVLLDE IEKAHPDVLE AFYNVFDKGL MEDGTGLVVD FKNTVMLATS NVGAELLLDT PTAQLGSEAF NEALHKVLLQ AFRPAFLARM TVVAYRPLDE QTLEGIVLAK LEKLRGRYKA ATGKQFEFDS GIVKAVLAKC SAAGARDVEN VLMTQVTGKL AEWVLE
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