Gene Pfl01_3407 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3407 
Symbol 
ID3713395 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3886264 
End bp3887748 
Gene Length1485 bp 
Protein Length494 aa 
Translation table11 
GC content62% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_349136 
Protein GI77459629 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGCCG CCGCCCAGAA TCAAGCCAGC GAAAATGCTG CCGCCGAGAC TTTATCCCTG 
CTCGATCGAA TCATCGCCGA GGGCCGCATG GCCCATGACG ACAGTCAGCA GGATTACGCC
CGCGACATGC TCGCGGAATT CGCCACCCAG GTACTCGACG AAGGCATGGC CATCGACAAG
GACACCGTGG CGATGATCAA CGACCGCATC AGCCAGATCG ACGAACTGAT CAGCGCCCAG
CTCAACGAAG TGCTGCATCA CCCGGACCTG CAAAAACTCG AAGCGTCCTG GCGTGGCCTG
CACATGCTGG TGCAGAACAC CGAAACCAGC ACCCGGCTGA AACTGCGCCT GCTCAACGTG
ACCCAGAAAG AGCTGCAGAA CGACCTGGAA AAAGCCGTCG AATTCGACCA GAGCGCGCTG
TTCAAAAAGA TCTATGAAGA GGAATACGGC ACCTTCGGTG GTCACCCGTT CAGCCTGCTG
GTGGGCGACT ACACCTTCGG CCGCCACCCG CAGGACATCG GCCTGCTGGA GAAACTGTCG
AACGTCGCCG CCGCTGCCCA CGCGCCGTTC ATTGCCGCCG CCAGCCCGCG TCTGTTCGAC
ATGAACAGCT TCACCGAACT GGCCGTGCCG CGTGATCTGT CGAAAGTGTT CGAGAGCCAG
GAACTGATCA AGTGGCGCTC GTTCCGTGAA AGCGAAGACT CGCGTTACGT CTCGCTAGTG
CTGCCGCACT TCCTGCTGCG TCTGCCTTAC GGCCCGGACA CTTCGCCAGT GGAAGGCATC
AACTACGTCG AAGACACCAA CGGCACCGAC CACAGCAAAT ACCTGTGGGG TAACGCCGCG
TGGGCGCTGT CGCAACGCAT CACCGAAGCC TTTGCCAAGT ACGGCTGGTG CGCGGCGATC
CGTGGCGCTG AAGGCGGCGG CGCGGTTGAA GGCCTGCCCG CGCACACCTT CCGCACCAGC
TCCGGTGATC TGTCGCTCAA ATGCCCGACC GAAGTGGCGA TCACCGACCG CCGCGAGAAG
GAACTCAACG ACCTCGGCTT CATCGCCCTG TGCCACAAGA AGAACAGCGA CGTCGCGGTG
TTCTTCGGCG GCCAGACCAC CAACAAATCC AAGGTCTACA ACACCAACGA GGCCAACGCC
AACGCACGGA TCTCGGCGAT GTTGCCGTAC GTGCTCGCGG CCTCGCGTTT CGCCCATTAC
CTGAAGGTGA TCATGCGCGA CAAGGTCGGC AGCTTCATGA CCCGCGACAA CGTGCAGACC
TACCTCAACA ACTGGATCGC CGACTACGTG CTGATCAACG ACAACGCTCC GCAGGAGATC
AAGGCGCAGT ACCCGTTGCG TGAAGCGCGG GTGGATGTCA CCGAAGTCGC CGGCAAGCCC
GGTGCCTATC GCGCGACGGT GTTCCTGCGG CCGCACTTCC AGCTCGAAGA GCTGACCGCG
TCGATCCGCC TGGTCGCGAC CCTGCCGCCA CCGGTAGCCG CCTGA
 
Protein sequence
MPAAAQNQAS ENAAAETLSL LDRIIAEGRM AHDDSQQDYA RDMLAEFATQ VLDEGMAIDK 
DTVAMINDRI SQIDELISAQ LNEVLHHPDL QKLEASWRGL HMLVQNTETS TRLKLRLLNV
TQKELQNDLE KAVEFDQSAL FKKIYEEEYG TFGGHPFSLL VGDYTFGRHP QDIGLLEKLS
NVAAAAHAPF IAAASPRLFD MNSFTELAVP RDLSKVFESQ ELIKWRSFRE SEDSRYVSLV
LPHFLLRLPY GPDTSPVEGI NYVEDTNGTD HSKYLWGNAA WALSQRITEA FAKYGWCAAI
RGAEGGGAVE GLPAHTFRTS SGDLSLKCPT EVAITDRREK ELNDLGFIAL CHKKNSDVAV
FFGGQTTNKS KVYNTNEANA NARISAMLPY VLAASRFAHY LKVIMRDKVG SFMTRDNVQT
YLNNWIADYV LINDNAPQEI KAQYPLREAR VDVTEVAGKP GAYRATVFLR PHFQLEELTA
SIRLVATLPP PVAA