Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_3400 |
Symbol | |
ID | 3713388 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 3876988 |
End bp | 3877956 |
Gene Length | 969 bp |
Protein Length | 322 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | |
Product | 2-hydroxyacid dehydrogenase |
Protein accession | YP_349129 |
Protein GI | 77459622 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCGCCA CCGTTCTGGT ACTGGTTGAA ACCATCAATG ACTATTTGCC GATCCTCGAA CGTCAGGGTT TTCACCTGAT TCTCGCGCCG ACCCCAGCCG AACGCGCGCA AGCCATCGCC ACCCACGGGG CGCGGATCGA CGCGGTACTG ACCCGTGGCC CGCTGGGCTT ATATGCTGAA GAAATCGCGG CCTTGCCCGC GCTGAAAATC ATCTGCGTGA TCGGCGCCGG TTACGAGCAG GTCGACCTGC AGGCCGCCAG TGACCGTGGG CTGACCGTGA CCAACGGCGC CGGCGTCAAC GCTTCGTCGG TGGCCGACCA CGCCATGGCG ATGCTGCTGG CGCTGGTGCG CGACATCCCG CGCTGCGATG GGGCGGTGCG TCGGGGCGAG TGGCCGAAGA TCATGCGCCC GTCGCTGGCC GGCAAGCGCC TGGGCATTCT CGGTCTGGGC GCGGTGGGGA TGGCGATTGC CAAACGCGCG GGCCTGGGCT TCGACATGGA GATCAGCTAC CACAACCGTC AGGTGCGCAG CGACGTGCCT TACGCGTTCT GCTCGACCCC GACCGAACTG GCCCGGGCCT CGGATTTTCT GGTAGTCGCC ACGCCCGGCG GCATCGGCAG CCAGCATCTG GTGACCCGCC CGGTGCTCGA TGCTTTGGGT CCCAACGGTT TTATCGTCAA CATTGCCCGC GCCAGCGTGA TCGCCACCGC CGATCTGATC AGCGCGCTGG AACAACGGCG AATTGCCGGC GCAGCGCTGG ATGTGTTCGA TCACGAGCCG CAAGTACCCG ATGCGCTGAA GAGCCTGAGC AATGTGCTTC TCACCCCGCA CGTCGCCGGG CTGTCACCGG AAGCCACTCA AGGCACCGTG GAGCTGGTGG GCAAGAATCT GGTGGCGTTC TTCTCCGGGC AACCGGTGCT GACGCCGCTG CAGTTGCCGC CGAAACTGAA CAACCAGCGC GTGCACTAA
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Protein sequence | MPATVLVLVE TINDYLPILE RQGFHLILAP TPAERAQAIA THGARIDAVL TRGPLGLYAE EIAALPALKI ICVIGAGYEQ VDLQAASDRG LTVTNGAGVN ASSVADHAMA MLLALVRDIP RCDGAVRRGE WPKIMRPSLA GKRLGILGLG AVGMAIAKRA GLGFDMEISY HNRQVRSDVP YAFCSTPTEL ARASDFLVVA TPGGIGSQHL VTRPVLDALG PNGFIVNIAR ASVIATADLI SALEQRRIAG AALDVFDHEP QVPDALKSLS NVLLTPHVAG LSPEATQGTV ELVGKNLVAF FSGQPVLTPL QLPPKLNNQR VH
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