Gene Pfl01_3396 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3396 
Symbol 
ID3713384 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3874222 
End bp3875502 
Gene Length1281 bp 
Protein Length426 aa 
Translation table11 
GC content62% 
IMG OID 
Productaromatic amino acid permease 
Protein accessionYP_349125 
Protein GI77459618 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.252294 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGATC AGGCCAATAG CGTCGAACAA CGCTTTGAGG CGGCAGCACC AGCCGAACTG 
TCGAGCTGGA ATCGCCATGA CACTACCTGG ATGTTGGGAC TGTTTGGGAC GGCCATCGGC
GCCGGTACCC TGTTTTTGCC GATCAACGCA GGTCTGGGTG GCTTCTGGCC GCTGGTGATC
CTCGCGCTGC TGGCCTTCCC GATGACGTTT TACGCACACC GCGGCCTGAC CCGCTTCGTG
CTTTCCGGTC GCGAAGGCGC CGACATCACA GACGTGGTGG AACAGCATTT CGGCATCAAG
GCCGGCGCGC TGATCACCCT GCTGTACTTC TTCGCTATCT TCCCGATCCT GCTGATCTAC
AGCGTCGGCC TGACCAACAC GGTCGCCAGT TTCCTCGAGC ACCAACTGCA CATCACGCAG
CCACCGCGCG CGCTGCTGTC GTTCGTGCTG ATTCTCGGCC TGCTGGCCGT GGTGCGCTGC
GGCGAGCAAG TGATCGTCAA GGCCATGAGC CTTATGGTGT ATCCGTTCAT CGTCGCGCTG
CTGTTCCTGG CGGTGTATCT GATTCCGCAC TGGAACGGCG GCATCCTGAC CACCGCTTCG
CAAGTGCCGG CACCGTCGGC GCTGCTGCAC ACGCTGTGGC TGGCGATTCC GGTGATGGTG
TTCTCGTTCA ACCACTCGCC GATCATCTCG GCGTTTGCGG TGGATCAGAA GCGCCGTTAC
GGCGTCCACG CTGACGAGCG CAGCTCGCAG ATCCTGTCCC GCGCGCACCT GCTGATGGTG
GTGATGGTGC TGTTCTTCGT CTTCAGTTGC GTGCTGACCC TGTCGCCGGA GCAACTGGCG
CAAGCCAAGG CGCAGAACCT GTCGATCCTG TCTTACCTGG CCAACCACTT CAGCAACCCG
ACCATCGCGT TCGCGGCGCC GCTGATTGCG TTTGTGGCGA TCTCCAAGTC GTTCCTCGGC
CACTACATCG GTGCCAGCGA AGGCCTGAAG GGCTTGATCG TCAAGAGCGG CAAGCGTCCG
GGCGCCAAGG CGCTGGACCG CATCGTGGCG GCGTTCATGC TGGTGGTGTG CTGGATCGTG
GCGACCCTGA ACCCGAGCAT CCTCGGCATG ATCGAAACCA TCGGTGGCCC GGTCATCGCG
GCGATCCTGT TCCTGATGCC TATGTACGCG ATCCGCAAAG TGCCGGCGAT GGCCCGTTAT
CGTGGGCAGA TGTCGAACGT GTTTGTCACC GCAGTGGGTC TGGTGGCGAT TTCGGCGTTG
ATCTACTCGC TGACTGCTTA A
 
Protein sequence
MNDQANSVEQ RFEAAAPAEL SSWNRHDTTW MLGLFGTAIG AGTLFLPINA GLGGFWPLVI 
LALLAFPMTF YAHRGLTRFV LSGREGADIT DVVEQHFGIK AGALITLLYF FAIFPILLIY
SVGLTNTVAS FLEHQLHITQ PPRALLSFVL ILGLLAVVRC GEQVIVKAMS LMVYPFIVAL
LFLAVYLIPH WNGGILTTAS QVPAPSALLH TLWLAIPVMV FSFNHSPIIS AFAVDQKRRY
GVHADERSSQ ILSRAHLLMV VMVLFFVFSC VLTLSPEQLA QAKAQNLSIL SYLANHFSNP
TIAFAAPLIA FVAISKSFLG HYIGASEGLK GLIVKSGKRP GAKALDRIVA AFMLVVCWIV
ATLNPSILGM IETIGGPVIA AILFLMPMYA IRKVPAMARY RGQMSNVFVT AVGLVAISAL
IYSLTA