Gene Pfl01_3391 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3391 
Symbol 
ID3713379 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3867985 
End bp3868692 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content61% 
IMG OID 
Producttwo component transcriptional regulator 
Protein accessionYP_349120 
Protein GI77459613 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATAACC TGGGTTTTGG CAGAGTCCTG CTGGTGGAAG ACGATGAGCG GCTGGCCGCA 
CTGATCGCCC ACTTTCTCGA ACAACACGGC TACGAGGTAC GCACGGTGCA TCGCGGTGAC
CTGGCCGTGG CCGCGTTTCT CGAATTCAAG CCCAAAGTGG TGGTGCTCGA CCTGATGCTG
CCAGGGCAGA GCGGCCTGCA CGTGTGCCGG GAAATCCGCA GCGTGTCGGA CACGCCGATT
GTCATCCTGA CGGCCAAGGA AGATGACCTC GACCATATTC TGGGCCTTGA GTCCGGGGCC
GACGACTACG TGATCAAACC GATCAAGCCG CCCGTTCTGC TCGCACGCCT GCGCGCGCTG
CAACGCCGGC AGGTGCCGGA CAGCGGTGTG GTCAGCTCGC TGGAATTCGG CAACCTGATA
ATCGACCGCA GTTGCCGCGA AGTGCGTCTG GCGGGCGAGC TGATCGAACT GACCACCATG
GAATTCGAAC TGCTGTGGCT GCTGGCCAGC GCCGCCGGCA AGATCCTGTC GCGCGATGAC
ATTCTCAACC GCATGCGCGG CATCGCGTTC GATGGCCTCA ACCGCAGCGT CGACGTGTAC
ATCAGCAAAT TGCGCAACAA ACTCAAGGAC AACCCTCGCG AACCGGTGTG CATCAAGACC
GTGTGGGGCA AGGGTTACCT GTTCAATCCG TTTGCGTGGG AGTTGTAG
 
Protein sequence
MDNLGFGRVL LVEDDERLAA LIAHFLEQHG YEVRTVHRGD LAVAAFLEFK PKVVVLDLML 
PGQSGLHVCR EIRSVSDTPI VILTAKEDDL DHILGLESGA DDYVIKPIKP PVLLARLRAL
QRRQVPDSGV VSSLEFGNLI IDRSCREVRL AGELIELTTM EFELLWLLAS AAGKILSRDD
ILNRMRGIAF DGLNRSVDVY ISKLRNKLKD NPREPVCIKT VWGKGYLFNP FAWEL