Gene Pfl01_3380 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3380 
Symbol 
ID3713330 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3853752 
End bp3855167 
Gene Length1416 bp 
Protein Length471 aa 
Translation table11 
GC content64% 
IMG OID 
Productheavy metal sensor Signal transduction histidine Kinases (STHK) 
Protein accessionYP_349109 
Protein GI77459602 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATCG CCGGCACGTA TTCCCTGACC TTGCGTCTGG CGCTGGTCTT CGCCGTGCTC 
GCCTTTGCCG CGCTGGGAGG CCTGGGCGCG GCGCTGTACA ACCAACTGGA AGCAGCTCTG
ATTCGCCGCG ATGACATCCA GTTGGTCAGT CGCGTCGATC AGTTGCGCAC CTTCCTCAAC
GACAGCAACA CCCTGGAACT GATCAAGAAC AAGCCGGCGC TGTTTCAGAA CATGCTCGGC
AACCGCGAAG CCTTGCTGAC CATCGGCGCA CCCGGCCAGC CGCCGTTGCT GGTGGTCAAC
CCCGGCAACC TCGCCACCCC GAACTTGCCC GCCGTACCGA TCGATCATCC GATGGCCCTG
AGCGATGTAC AGCACTTGCC GAGCGTCGAC GGTGTGCCGT TTTCGGCGGT GGCGGCGACC
ATCGACTCGG GCGATCTGGG CAACCTGCAG GTGCTCACCG GACGCCTGAT GACCGAGCGC
ACGGCGATGC TCGCCAATTA CCGGCTCAGC GTGTACGGCC TCGCGTCATT GGCCGCGATT
GTGCTGGCGC TGGTCGGCTG TCTGCTGGTG TATCGCGGCC TGCTGCCGTT GCGGCGGATG
GCCCGGCATG CCCACGGGAT CGGCATCGCC AACCTTGGCG AACGCCTCGA CCGCCAAGGC
ACGCCTCGTG AATTGCAGCC GATGATCGAA GCCTTCAACG CGATGCTGGA CCGGCTCGAT
CGAGGGGTTG CGCAACTGAG CCAGGTCTCC ACCGACATGG CCCACGAACT GCGCACGCCG
ATCAACAACC TGCTCGGGGA AACACAGGTC GCGTTGCAAC AGAACCGCAG CGTCGACGCC
TATCAGCAGT TGCTCGCCTC CAACGTGGAA GAACTCGAAC GGCTGGCGCG GATGCTCGAC
AACATGCTGT TTCTCGCCCG CACCGACCCG GCCAGCGCGC TGAGCCAGCG GCAGGAGCTG
GACGCCAGCG ATGAGATGCA ACGCATTGCC GATTACTTCG AAGGATTGGC GGCGGATGTC
GGCGTCACCA TCGAGGCCAG TGGCAGCGGC GTGATCTGGG CCGAGCCGAT GCTGCTGCGG
CGGGCCCTGG CCAACCTGTG CGCCAACGCG ATCAAGTACG GCGCGGCGGA TTCGACGTTG
CAGGTCGAAG CCATCGCTGA AACGGACGGC AGCTATCTGC GGGTGCGCAA CCAGGGCACG
ACCATTCCTG CCGAACACCT GTCGCGACTG TTCGAACGCT TCTACCGCGT CGATCCGTCA
CGCGAGCGCT CGGCCCAGTC CAACGGCTTG GGCCTGTCGA TTGTCGCGAC CATCATGCAG
TTGCATCAGG GCCGTTACAG CGTCAGCAGC GCTGATGGCA TCACCTGCTT TGAACTGTTC
TTTCCGGCAC GGGAGACGCG AGACGCAGGT GCGTGA
 
Protein sequence
MKIAGTYSLT LRLALVFAVL AFAALGGLGA ALYNQLEAAL IRRDDIQLVS RVDQLRTFLN 
DSNTLELIKN KPALFQNMLG NREALLTIGA PGQPPLLVVN PGNLATPNLP AVPIDHPMAL
SDVQHLPSVD GVPFSAVAAT IDSGDLGNLQ VLTGRLMTER TAMLANYRLS VYGLASLAAI
VLALVGCLLV YRGLLPLRRM ARHAHGIGIA NLGERLDRQG TPRELQPMIE AFNAMLDRLD
RGVAQLSQVS TDMAHELRTP INNLLGETQV ALQQNRSVDA YQQLLASNVE ELERLARMLD
NMLFLARTDP ASALSQRQEL DASDEMQRIA DYFEGLAADV GVTIEASGSG VIWAEPMLLR
RALANLCANA IKYGAADSTL QVEAIAETDG SYLRVRNQGT TIPAEHLSRL FERFYRVDPS
RERSAQSNGL GLSIVATIMQ LHQGRYSVSS ADGITCFELF FPARETRDAG A