Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_3380 |
Symbol | |
ID | 3713330 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 3853752 |
End bp | 3855167 |
Gene Length | 1416 bp |
Protein Length | 471 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | |
Product | heavy metal sensor Signal transduction histidine Kinases (STHK) |
Protein accession | YP_349109 |
Protein GI | 77459602 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAATCG CCGGCACGTA TTCCCTGACC TTGCGTCTGG CGCTGGTCTT CGCCGTGCTC GCCTTTGCCG CGCTGGGAGG CCTGGGCGCG GCGCTGTACA ACCAACTGGA AGCAGCTCTG ATTCGCCGCG ATGACATCCA GTTGGTCAGT CGCGTCGATC AGTTGCGCAC CTTCCTCAAC GACAGCAACA CCCTGGAACT GATCAAGAAC AAGCCGGCGC TGTTTCAGAA CATGCTCGGC AACCGCGAAG CCTTGCTGAC CATCGGCGCA CCCGGCCAGC CGCCGTTGCT GGTGGTCAAC CCCGGCAACC TCGCCACCCC GAACTTGCCC GCCGTACCGA TCGATCATCC GATGGCCCTG AGCGATGTAC AGCACTTGCC GAGCGTCGAC GGTGTGCCGT TTTCGGCGGT GGCGGCGACC ATCGACTCGG GCGATCTGGG CAACCTGCAG GTGCTCACCG GACGCCTGAT GACCGAGCGC ACGGCGATGC TCGCCAATTA CCGGCTCAGC GTGTACGGCC TCGCGTCATT GGCCGCGATT GTGCTGGCGC TGGTCGGCTG TCTGCTGGTG TATCGCGGCC TGCTGCCGTT GCGGCGGATG GCCCGGCATG CCCACGGGAT CGGCATCGCC AACCTTGGCG AACGCCTCGA CCGCCAAGGC ACGCCTCGTG AATTGCAGCC GATGATCGAA GCCTTCAACG CGATGCTGGA CCGGCTCGAT CGAGGGGTTG CGCAACTGAG CCAGGTCTCC ACCGACATGG CCCACGAACT GCGCACGCCG ATCAACAACC TGCTCGGGGA AACACAGGTC GCGTTGCAAC AGAACCGCAG CGTCGACGCC TATCAGCAGT TGCTCGCCTC CAACGTGGAA GAACTCGAAC GGCTGGCGCG GATGCTCGAC AACATGCTGT TTCTCGCCCG CACCGACCCG GCCAGCGCGC TGAGCCAGCG GCAGGAGCTG GACGCCAGCG ATGAGATGCA ACGCATTGCC GATTACTTCG AAGGATTGGC GGCGGATGTC GGCGTCACCA TCGAGGCCAG TGGCAGCGGC GTGATCTGGG CCGAGCCGAT GCTGCTGCGG CGGGCCCTGG CCAACCTGTG CGCCAACGCG ATCAAGTACG GCGCGGCGGA TTCGACGTTG CAGGTCGAAG CCATCGCTGA AACGGACGGC AGCTATCTGC GGGTGCGCAA CCAGGGCACG ACCATTCCTG CCGAACACCT GTCGCGACTG TTCGAACGCT TCTACCGCGT CGATCCGTCA CGCGAGCGCT CGGCCCAGTC CAACGGCTTG GGCCTGTCGA TTGTCGCGAC CATCATGCAG TTGCATCAGG GCCGTTACAG CGTCAGCAGC GCTGATGGCA TCACCTGCTT TGAACTGTTC TTTCCGGCAC GGGAGACGCG AGACGCAGGT GCGTGA
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Protein sequence | MKIAGTYSLT LRLALVFAVL AFAALGGLGA ALYNQLEAAL IRRDDIQLVS RVDQLRTFLN DSNTLELIKN KPALFQNMLG NREALLTIGA PGQPPLLVVN PGNLATPNLP AVPIDHPMAL SDVQHLPSVD GVPFSAVAAT IDSGDLGNLQ VLTGRLMTER TAMLANYRLS VYGLASLAAI VLALVGCLLV YRGLLPLRRM ARHAHGIGIA NLGERLDRQG TPRELQPMIE AFNAMLDRLD RGVAQLSQVS TDMAHELRTP INNLLGETQV ALQQNRSVDA YQQLLASNVE ELERLARMLD NMLFLARTDP ASALSQRQEL DASDEMQRIA DYFEGLAADV GVTIEASGSG VIWAEPMLLR RALANLCANA IKYGAADSTL QVEAIAETDG SYLRVRNQGT TIPAEHLSRL FERFYRVDPS RERSAQSNGL GLSIVATIMQ LHQGRYSVSS ADGITCFELF FPARETRDAG A
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