| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_3357 |
|---|
| Symbol | |
|---|
| ID | 3713288 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | - |
|---|
| Start bp | 3831543 |
|---|
| End bp | 3832430 |
|---|
| Gene Length | 888 bp |
|---|
| Protein Length | 295 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_349086 |
|---|
| Protein GI | 77459579 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.485418 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCGACT GGAACGACCT GCGGTTCTTT CTCGAGTTGC AACGCAGCGG GCGCTTGCTC
ACTGCCGCCC GCCGCCTGAA CACCACTCAC GCCACCGTGG CCCGGCACAT CGAGGCCATC
GAAAAAAGCC TCGGCACCGC GCTCTTCGTC CAGCACGCCC AAGGCTACGA AATGACTCCG
GCGGGGGAGG CGCTGCTCAA ACACGCCGAA GCCATGGAAA ACGTCGCGCT GCTGGCTCAG
GAAGAAATCA CCCAATCGAC GGCGCCGCTG GGCAAGATCC GCGTCGGGGT CACCGAAGGC
CTCGGCATCA TGTTTCTCGC CAGCCGCATG ATCGGGTTGT TCGAACGCTA CCTGGGACTG
GAAGTGGAAC TGGTGGCGGT GCCGCGCTTC GTCAGCATCC TCAATCGCGA GGCGGAAATC
AGCATTCACC TTGAACGGCC GGCGGCGGAC ATGCTGGTCA CCCGCAAACT CACCGACTAC
CGACTCGCGC TCTATGCCAG CCGCGCCTAC CTGGACAACG CGCCGCCATT GCGCAGCCGC
GAGGATCTTG GCCGGCATGC GTGGATCGGC TATGTCGATG ATCTGCTGTT CAGTCAGGAG
CTGATGTTTC TCAACAGCTT CTGTCGCAAC CCACGGGTGG TGTTTCACAG CACCAGCGTG
ATCGCCCAGC AGCAGGCGGC GCGCTCGGGG CTGGGGATTG CGGTGCTGCC TTGTTACATG
GCGGCGTCGG ACCCGGATCT GGTGGCGCTG TTGCCGGATG AGAGCATTGA GCGCAGTTAC
TGGATCAGTA CGCGGCGCGA GTTGCACAAA TCGGTGCGGT TGCGGGTGGT CTGGGATTAC
GTCGTGGGCT TGTGCGAAGG CGAGCGCGAG TTGTTAATGG GCCAGTAA
|
|---|
| Protein sequence | MFDWNDLRFF LELQRSGRLL TAARRLNTTH ATVARHIEAI EKSLGTALFV QHAQGYEMTP
AGEALLKHAE AMENVALLAQ EEITQSTAPL GKIRVGVTEG LGIMFLASRM IGLFERYLGL
EVELVAVPRF VSILNREAEI SIHLERPAAD MLVTRKLTDY RLALYASRAY LDNAPPLRSR
EDLGRHAWIG YVDDLLFSQE LMFLNSFCRN PRVVFHSTSV IAQQQAARSG LGIAVLPCYM
AASDPDLVAL LPDESIERSY WISTRRELHK SVRLRVVWDY VVGLCEGERE LLMGQ
|
|---|
| |