Gene Pfl01_3356 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3356 
Symbol 
ID3713287 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3830182 
End bp3831444 
Gene Length1263 bp 
Protein Length420 aa 
Translation table11 
GC content63% 
IMG OID 
Productmajor facilitator transporter 
Protein accessionYP_349085 
Protein GI77459578 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.515977 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCACTC ACCTCGATCG CCGTAATAAC CTGTCTCTCG ACAGCCTGAA TTTTTTCCTC 
GCCGACGTGC GTGACGGCCT GGGGCCCTAT TTGGCGATTT ACCTGCTGGC GGTTCACCAC
TGGGAGCCGG CGAGCATCGG TCTGGTGATG ACCATAGCCG GGATCGCCGC ACTGATCACG
CAGACCCCGG CAGGTGCGCT GGTCGACAGC ACGCGCTTCA AACGGTCGCT CATTGCGGTT
GCCGCGCTGG TGGTCACCGC AAGCTGTCTG CTGCTGCCGT TTGTGACGTC GTTCAGTCTG
GTGGCCCTGA CGCAGGCGAT CAGTGCCGCT GCCGCTTCGA TCTTCGCGCC CGCCATTTGC
GCGATCACCC TGGGTATCAC CGGGCCGCGA GCCTTCACGC GAAGGACCGG GCGCAACGAA
ACCTTCAACC ATGCCGGCAA CGCCTGCGCC GCGTTGTTGG CCGGTTTGTC CGCGTACCTG
TTTGGTCCGG TTGCGGTGTT TTATTTGATG GCGGTCATGG CGCTGGCCAG TGTGATTGCC
GTTTCGTTCG TATCGGCCGA CGCCATTGAT CACGATCTCG CCCGGGGTCT GGAGCCCAGC
GCAACGGGGC AGGGCAAGCA GCCTTCGGGC TTTTCCGTGT TGCTCACCAA CAGGCCGCTG
CTGATGTTCG CGATTTGTTG TGCGCTGTTT CATCTGGCGA ACGCGGCGAT GTTGCCGCTG
GTGAGTCAGA AACTGGCGCA GGCCAATCTG CAGATGGCCA CGCCACTCAC GTCCGCCTGC
ATCGTCGCGG CACAACTGGT GATGGTGCCG GTCGCGCTGC TGGTGGGGGC GAAGGCCGAT
CTGTGGGGGC GCAAGCCGTT GCTGCTGGCG GGGTTTATGA TCCTGCCATT GCGCGGTGTG
CTGTATGTGC TGTCGAACGA TCCGTGGTGG CTGGTTTCGG TGCAGTTGCT CGATGGCATC
GGCGCGGGGA TTTTCGGCGC GCTGTTTCCG GTGGTGGTGA AAGACCTGAC GCTGGGCACC
GGACATTTCA ATGTCAGTCT CGGGGCGATT TCAACGGTGT TCGGTCTGGG CGCGGCATTG
AGCAACAGCC TGGCGGGGAT TGTGGTTCAG GAGGCCGGTT ACAGCGCTGC GTTCCTGACC
CTGGCGGCGG TGGCAATGGC GGCGCTGGTG CTGCTCTGGT TGGCAGTGCC GGAGACGGTG
CAGCGCTCCG ATACCGACTC GATCGCCCTG CAAGGCAAGG CGCCGCCGAT GGTTGCGCCA
TGA
 
Protein sequence
MATHLDRRNN LSLDSLNFFL ADVRDGLGPY LAIYLLAVHH WEPASIGLVM TIAGIAALIT 
QTPAGALVDS TRFKRSLIAV AALVVTASCL LLPFVTSFSL VALTQAISAA AASIFAPAIC
AITLGITGPR AFTRRTGRNE TFNHAGNACA ALLAGLSAYL FGPVAVFYLM AVMALASVIA
VSFVSADAID HDLARGLEPS ATGQGKQPSG FSVLLTNRPL LMFAICCALF HLANAAMLPL
VSQKLAQANL QMATPLTSAC IVAAQLVMVP VALLVGAKAD LWGRKPLLLA GFMILPLRGV
LYVLSNDPWW LVSVQLLDGI GAGIFGALFP VVVKDLTLGT GHFNVSLGAI STVFGLGAAL
SNSLAGIVVQ EAGYSAAFLT LAAVAMAALV LLWLAVPETV QRSDTDSIAL QGKAPPMVAP