Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_3352 |
Symbol | |
ID | 3713283 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 3826693 |
End bp | 3827481 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | |
Product | short chain dehydrogenase |
Protein accession | YP_349081 |
Protein GI | 77459574 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.589811 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGGTGTTGA CCGGTGCCAG CGGCGGCATC GGGATAGCGA TCACGCGTGC CTTGTGCGCT GCCGGTGCGC AGGTCCTGGC GGTCGCGCGG CATCAGGAAT CGCTGCGCCT GTTGCTCGAC CTTTACCCGC AGAACCTGTG CTGGGTCGCC GCCGATCTGA CGTTCCTCAG CGACCGGCGC AAGGTGTTGG CCGCCGCCGA GGCCATCGGC GGCATCAACC TGCTGATCAA CGCCGCCGGG GTCAATCACT TCGCAATGCT GGAACAGCTC GACGACAGCG ACATCAACGC CATGCTGGCG GTGAACATCA GTGCGCCGAT CTGCCTGACC AAACTGTTGC TGCCGCTGCT CAAGCAGGCC GACAGTGCCA TGGTGGTCAA CGTCGGCTCG ACCTATGGTT CGATCGGTTA TCCCGGTTAT GCCAGTTACT GCGCGACCAA GTTTGCCTTG CGCGGATTTT CCGAGGCCTT GCGCCGAGAG TTGGCGGATA CCCGGGTCGG TGTGTTGTAC GTGGCGCCCC GCGCCACACG CACCGCCATG AACAGCCCCG CCGCCCAGGC ATTGAACGAC GCACTCAAAT CCAGCGTCGA CGACCCGCAA GCCGTCGCGA ATGCCGTAAT CCATGCGATT GCCGGCGATC GCCGCGACCT CTATCTGGGC TGGCCGGAGC GCTTCTTCGT ACGCCTCAAC AGCCTGCTGC CCAATCTGGT GGATCGCGGT CTGCGCAAGC AATTGCCGTT GATCCGTCGC CTGAGTGAAA AACCCGAGAA CGAGACGCCG AAACCATGA
|
Protein sequence | MVLTGASGGI GIAITRALCA AGAQVLAVAR HQESLRLLLD LYPQNLCWVA ADLTFLSDRR KVLAAAEAIG GINLLINAAG VNHFAMLEQL DDSDINAMLA VNISAPICLT KLLLPLLKQA DSAMVVNVGS TYGSIGYPGY ASYCATKFAL RGFSEALRRE LADTRVGVLY VAPRATRTAM NSPAAQALND ALKSSVDDPQ AVANAVIHAI AGDRRDLYLG WPERFFVRLN SLLPNLVDRG LRKQLPLIRR LSEKPENETP KP
|
| |