Gene Pfl01_3352 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3352 
Symbol 
ID3713283 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3826693 
End bp3827481 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content63% 
IMG OID 
Productshort chain dehydrogenase 
Protein accessionYP_349081 
Protein GI77459574 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.589811 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTGTTGA CCGGTGCCAG CGGCGGCATC GGGATAGCGA TCACGCGTGC CTTGTGCGCT 
GCCGGTGCGC AGGTCCTGGC GGTCGCGCGG CATCAGGAAT CGCTGCGCCT GTTGCTCGAC
CTTTACCCGC AGAACCTGTG CTGGGTCGCC GCCGATCTGA CGTTCCTCAG CGACCGGCGC
AAGGTGTTGG CCGCCGCCGA GGCCATCGGC GGCATCAACC TGCTGATCAA CGCCGCCGGG
GTCAATCACT TCGCAATGCT GGAACAGCTC GACGACAGCG ACATCAACGC CATGCTGGCG
GTGAACATCA GTGCGCCGAT CTGCCTGACC AAACTGTTGC TGCCGCTGCT CAAGCAGGCC
GACAGTGCCA TGGTGGTCAA CGTCGGCTCG ACCTATGGTT CGATCGGTTA TCCCGGTTAT
GCCAGTTACT GCGCGACCAA GTTTGCCTTG CGCGGATTTT CCGAGGCCTT GCGCCGAGAG
TTGGCGGATA CCCGGGTCGG TGTGTTGTAC GTGGCGCCCC GCGCCACACG CACCGCCATG
AACAGCCCCG CCGCCCAGGC ATTGAACGAC GCACTCAAAT CCAGCGTCGA CGACCCGCAA
GCCGTCGCGA ATGCCGTAAT CCATGCGATT GCCGGCGATC GCCGCGACCT CTATCTGGGC
TGGCCGGAGC GCTTCTTCGT ACGCCTCAAC AGCCTGCTGC CCAATCTGGT GGATCGCGGT
CTGCGCAAGC AATTGCCGTT GATCCGTCGC CTGAGTGAAA AACCCGAGAA CGAGACGCCG
AAACCATGA
 
Protein sequence
MVLTGASGGI GIAITRALCA AGAQVLAVAR HQESLRLLLD LYPQNLCWVA ADLTFLSDRR 
KVLAAAEAIG GINLLINAAG VNHFAMLEQL DDSDINAMLA VNISAPICLT KLLLPLLKQA
DSAMVVNVGS TYGSIGYPGY ASYCATKFAL RGFSEALRRE LADTRVGVLY VAPRATRTAM
NSPAAQALND ALKSSVDDPQ AVANAVIHAI AGDRRDLYLG WPERFFVRLN SLLPNLVDRG
LRKQLPLIRR LSEKPENETP KP