Gene Pfl01_3351 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3351 
Symbol 
ID3713282 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3826011 
End bp3826685 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content61% 
IMG OID 
ProductTenA family transcription regulator 
Protein accessionYP_349080 
Protein GI77459573 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTTTT TCGACACCCT GCAAGAAGCC ACGCACCAGG AACGCCACGA GCTGTTCAAT 
CTGCCGATCA TCCTCGATGC GCTGCAAGGC AAGGTCAGCC TTGAAAGCTA TCGCGCGTTT
CTCGCCCAGG CCTACTACCA CGTGCGCCAC ACCGTACCGC TGATGATGGC CTGTGGTGCA
CGCCTGCCGA CGCACCTGGA ATGGCTGCGC AAAGCCGTGT GCGAATACAT CGAGGACGAA
TACGGTCATG AGCAATGGGT GCTCAACGAC ATCGAGGCCT GTGGCGGTGA CCGTAACGCG
GTGCGTGATG GCCAGCCGTC GCTGCCGATC GAGCTGATGG TCAGCTTTCT CTACGACCTG
ATCGCCCGAG GCAATCCGGT GGGTCTGTTT GGCATGGTCA ACGTGCTGGA GGGCACCAGC
ATCGCCTTGG CCACCCATGC GGCGGGCAGC ATCCGCGAAC GTCTGGCGCT GCCGGAAACG
GCGTTCAGCT ACCTCAGTTC CCACGGTTCG CTGGACATCG AGCACATGCA AACCTATCGC
CGGCTGATGA ATCAGCTGGA AGATCCGGCC GACCAGGCGG CGGTGATCCA TGCCTCGAAA
GTCGTCTATC GGCTCTACGC CGACATGTTC CGCGGCCTGC CCCGTGACGC GGAGGCTCAA
CATGCAGCTG CATGA
 
Protein sequence
MSFFDTLQEA THQERHELFN LPIILDALQG KVSLESYRAF LAQAYYHVRH TVPLMMACGA 
RLPTHLEWLR KAVCEYIEDE YGHEQWVLND IEACGGDRNA VRDGQPSLPI ELMVSFLYDL
IARGNPVGLF GMVNVLEGTS IALATHAAGS IRERLALPET AFSYLSSHGS LDIEHMQTYR
RLMNQLEDPA DQAAVIHASK VVYRLYADMF RGLPRDAEAQ HAAA