Gene Pfl01_3346 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3346 
Symbol 
ID3713277 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3820876 
End bp3821949 
Gene Length1074 bp 
Protein Length357 aa 
Translation table11 
GC content61% 
IMG OID 
Productzinc-containing alcohol dehydrogenase superfamily protein 
Protein accessionYP_349075 
Protein GI77459568 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.62296 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCACCA TGAAAGCTGC CATTTTTGTC GAAAAAAATC GCATCGTGCT GGATGACAAA 
CCGATCCCGG AAGTCGGCCC GCTGGACGCT TTGATCCGGA TAACCACCAC GACAATTTGC
GGTACGGATG TGCACATCCT GCGCGGCGAA TACCCGGTGG CGAAGGGTTT GACGGTCGGT
CACGAACCGG TGGGGATCAT CGAACGTCTG GGATCACAGG TGCGCGGGTT TGTAGAGGGG
CAGCGCGTGA TTGCCGGCGC CATCACTCCC AGTGGGCAAA GTTATGCGTG CCTGTGTGGC
TGTGGTTCCC AGGACGGGCC GGACACTCGC CATGGTTTCC GGGCCATCGG CGGGTGGAAG
TTCGGCAACA CCATCGATGG CTGCCAGGCC GAATACGTAC TGGTGCCCGA TGCCTTGGCC
AATCTTTGTC CGATTCCTGA TGGCCTCAGT GATGAGCAGG TACTCATGTG TCCGGACATC
ATGTCCACCG GTTTTTCCGG TGCCGAACGG GGCGAGGTGA GCATCGGCGA CAGCGTCGCT
GTATTCGCCC TCGGCCCCAT TGGTCTGTGT GCAGTCGCCG GTGCCCGGCT CAAAGGCGCC
AGCACGATCA TCGGTGTCGA TGCGGTGGCC GAGCGCATGA CGGTAGCACG TCGATTGGGC
GCCACCCATG TCGTCAATTT TCGCGAGGGC GACGTGGTCG AGCAGATCAT GGCCCTCACC
GATGGGCGCG GTGTCGATGT CGCGATCGAG GCACTGGGCA CGCAAGGCAC CTTTGAATCG
GCGTTGCGCG TGCTGCGTCC GGGCGGCCGC TTGTCGAGCC TGGGCGTGTA TTCGAGCGAC
CTGCGCATTC CGCTCGACGC CTTTGCGGCC GGGTTGGGCG ATTACAGCAT CGTCACCACC
CTGTGCCCCG GCGGGAAAGA GCGTATGCGG CGTTTGATGG CGGTCGTGCA GAGCGGCATG
GTTGACCTTT CACCGTTGGT GACCCACCGG TTCAAACTGG ATGACATTGA AGCAGCCTAC
GATTTGTTTG CACACCAGCG TGACGGTGTG ATGAAGGTGG CGATTACCCC GTGA
 
Protein sequence
MATMKAAIFV EKNRIVLDDK PIPEVGPLDA LIRITTTTIC GTDVHILRGE YPVAKGLTVG 
HEPVGIIERL GSQVRGFVEG QRVIAGAITP SGQSYACLCG CGSQDGPDTR HGFRAIGGWK
FGNTIDGCQA EYVLVPDALA NLCPIPDGLS DEQVLMCPDI MSTGFSGAER GEVSIGDSVA
VFALGPIGLC AVAGARLKGA STIIGVDAVA ERMTVARRLG ATHVVNFREG DVVEQIMALT
DGRGVDVAIE ALGTQGTFES ALRVLRPGGR LSSLGVYSSD LRIPLDAFAA GLGDYSIVTT
LCPGGKERMR RLMAVVQSGM VDLSPLVTHR FKLDDIEAAY DLFAHQRDGV MKVAITP