Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_3343 |
Symbol | |
ID | 3713274 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 3817423 |
End bp | 3818673 |
Gene Length | 1251 bp |
Protein Length | 416 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | |
Product | transmembrane protein |
Protein accession | YP_349072 |
Protein GI | 77459565 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGACG CACTGGGTCT GGCGGGGGCC GCCGCGGCGT TGGGCATCGG CATGCTGGTC GGTCTGGAGC GCGAGCGGCA CAAAGGGCGC GGCGACAGCC GTGCCTGTGC CGGGTTGCGC ACGTTCGCGA TCACGGCGCT GCTGGGTTAC GTCGCGATGC AAGTGGGCGG CGCACTGCTG TTGGGCATTG TGGGCGGCTG TCTGGCGGTG CTGATCGGCG TGGCTTATTG GCGCAGCCTG AGCACTGATC CGGGGCTGAC CAGCGAAGTG GCCTTGCTCA CGGTGCTGGT ACTGGGTGCG CTATGCGGCA CAGCGCCGGA ACTGGCAATC GCCATTGGCG TGGTCATGGC GGGGCTGCTG GCTTACCGGC AGAAACTCCA TCACTTCGCC CGCAGCCAGT TGAGCGAAGC GGAGATGCGC GATGGGTTGG TGCTGCTGAT CGCAGCATTG GTGGTGTTGC CGCTGACGCC TGACCGGTTC ATCGGTCCCT ACTCGGCACT CAACCTGCGC ACCCTTTGTA CATTGACCGT GTTGCTGATG GCCGTCGGCG CCATCGGGCA TATCGCCGTG CGCACGCTGG GTGTGCGCTA CGGCTACGCG GTCAGCGCCA TCGCGTCCGG TTTCGCCTCC AGCACCATGA CGATTGCGGC GATGGGGCAT ATCGCCCGCA AAGACCCGGA GCACCTCAAG GTATTGAGTG CGGCGGCCCT GCTGTCGAAC CTGGCCACGG CGGCGCAGGT CGCGCTGATC CTCGGCACGG TCGACACCGC GCTGTTGCCG CACCTGTGGG GGCCGTTGCT GGCCGGGTTT GGCGTAACGC TGCTGTTCAG CCTGGGCCTG CTGTTCCCCA GGCCTGCGGT CGCTGCGAAC CAACCGATCA AGGTCGGCGG GGCGTTCAAT CTCAAGCTCG CGCTGGCGGT CACGTTGACC ATGGCCGGCG TGACGTTTTT GTCTTCGCTG ATGCTCGATC ACTTTGGCGA GGCGGGCGTG ATGCTGACTG CCGTACTCAG CGGATTCGCC GATGCTCATT CTTCCACGGC GTCGATTGCC ACCCTCGCCA AGGGTGGACT GTTGGATTAC GCCGCCATTG CGCCGCCCGT GCTGCTGGCG GTCAGCAGTA ACGCATTGAG CAAATGCCTG GTGGCCTGGA TCAGTGGCGG ACGCCGTTTC GCCGCGTATG TCATACCCGG TCAGATTCTG TTGACCGCTG CCATGTGGGC CGGTCTGCTG GTGGATCGAG CGACGATTTG A
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Protein sequence | MSDALGLAGA AAALGIGMLV GLERERHKGR GDSRACAGLR TFAITALLGY VAMQVGGALL LGIVGGCLAV LIGVAYWRSL STDPGLTSEV ALLTVLVLGA LCGTAPELAI AIGVVMAGLL AYRQKLHHFA RSQLSEAEMR DGLVLLIAAL VVLPLTPDRF IGPYSALNLR TLCTLTVLLM AVGAIGHIAV RTLGVRYGYA VSAIASGFAS STMTIAAMGH IARKDPEHLK VLSAAALLSN LATAAQVALI LGTVDTALLP HLWGPLLAGF GVTLLFSLGL LFPRPAVAAN QPIKVGGAFN LKLALAVTLT MAGVTFLSSL MLDHFGEAGV MLTAVLSGFA DAHSSTASIA TLAKGGLLDY AAIAPPVLLA VSSNALSKCL VAWISGGRRF AAYVIPGQIL LTAAMWAGLL VDRATI
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