Gene Pfl01_3334 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3334 
Symbol 
ID3713265 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3810621 
End bp3812162 
Gene Length1542 bp 
Protein Length513 aa 
Translation table11 
GC content52% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_349063 
Protein GI77459556 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGTGGCT ACATTCCCAA CCCGCCTAAA AACTATCGCA ACAAAGGAAC CGACCCCGTC 
GATATTCATG CCCAGCGTTG GGCTGAGTAT GAGAAACACG GGAAGGAACC GGCATCGGCT
CGTGAAAAAA TCGGCATTGC CCTGCGGATC GGAGTGTTCT TCGATGGTAC GGGGAATAAT
GCCAATAACG CAGCGGCCGG GCTTCTGTGT GGTGCTCATC ATCCGATTGC GGCTCAAGAT
ATTGATGCGA GTTGCAAGCC GTATATGAGT GATCCGGATA GTAGTTATGG CAATGATGTC
AGCAATATGA AAAAGCTGAG TGAGCTGTAT GACACGCCTG AGGCAACCGA AGGTGAGGGC
ACGCGAAAAC GTGCTTTTCG CATGGTGTAT GTCGAAGGGA TCGGCACCCG TTCAGGTGAA
AAAGACAGCA CCTTGGGAGC AGGTACTGGG CGTGGCGAAA CCGGAGTTGC CGGTCGTGTT
CAATCTTCGT TCGTGTTGAT CAAGCAGCGG ATCAAGGAGG CGCTGGACGA AAATCGGGGC
TGTGAAATTG TCTCCCTGAC ATTCGACACC TTCGGCTTCA GCCGTGGTGC GGCAGCCGCT
CGGCATTTTG CAAATGAAGT CGTGCGCGGC AAACAGGGTC CTTTAGGAGA AATCCTTCGA
AATAACGCAG CTTCCTTGAG TTCGACTTTC AGCGATCAAT ATAAAAGCGA TATCAATATG
GGCTTTATAG GCCTGTTCGA TACCGTTCCT TCCATTGCTG GCTGGTCCAA TCTGGGCAAC
ATCAAAAGCC CCGTTGCAAC AGGCATCAAG CTTTATCTGG ATCAACGCTA TTTCACTGAT
GTCCTCCAAT TGGTCGCACG CGATGAGTGC AGGGGAAATT TCGCCCTCAG CTGTGTAACG
CCAGATCATC AGGAGATCAT TTTGCCCGGT GTTCATTCCG ATATTGGTGG GGGCTACCTC
GAGGAGGCGG ATGAGTGCGT ACTCGTCAGC CCGATGCAGA CACTTGAGGT GTCGCTTAAC
ACTGATGTCG TAACCACCTC GATTTATCAG GATGCTTTAA CCGTGAAAAA TCAGTGGCTC
GCCAATGGCT GGCCTTCTGA AATGCTGGAA ATCGTCACGC CACCGCCACT CCTTATGCCC
AATAGTCCAC AGGATCGATC TAGTCCACAG ATCAAGCGCG TCTATGCCGC CGTTCAGCTC
AAACGCCCTG TGAGCGGGAT GCTTTCCAGA GTATGTCTAC GTGTGATGCA TCAACAGGCG
AAAGCCAAGG GAGTTCGCTT CAACGATATT CCTGAGACTC CCGAGTTTTC CATTCCTGCG
GAGCTTCAAG CTTTGTGTGA TCGTTTTGTC TCTGGCGACT ACAGCACCAC CCCGCAAGAG
GAGCAAATCC TGAAACTCAA GTACATTCAT ACATCCGCCA ACTGGAACCA CCCACTCGGC
CGAAGGGATG GAAGTGGCGT GAAAGCGGTT TACATCAACG CTCCCACGTC AGATGCAATT
CGAGTAAAAC ACCCGCACGT ACCTGATTGG ACGCTTTGGT AA
 
Protein sequence
MSGYIPNPPK NYRNKGTDPV DIHAQRWAEY EKHGKEPASA REKIGIALRI GVFFDGTGNN 
ANNAAAGLLC GAHHPIAAQD IDASCKPYMS DPDSSYGNDV SNMKKLSELY DTPEATEGEG
TRKRAFRMVY VEGIGTRSGE KDSTLGAGTG RGETGVAGRV QSSFVLIKQR IKEALDENRG
CEIVSLTFDT FGFSRGAAAA RHFANEVVRG KQGPLGEILR NNAASLSSTF SDQYKSDINM
GFIGLFDTVP SIAGWSNLGN IKSPVATGIK LYLDQRYFTD VLQLVARDEC RGNFALSCVT
PDHQEIILPG VHSDIGGGYL EEADECVLVS PMQTLEVSLN TDVVTTSIYQ DALTVKNQWL
ANGWPSEMLE IVTPPPLLMP NSPQDRSSPQ IKRVYAAVQL KRPVSGMLSR VCLRVMHQQA
KAKGVRFNDI PETPEFSIPA ELQALCDRFV SGDYSTTPQE EQILKLKYIH TSANWNHPLG
RRDGSGVKAV YINAPTSDAI RVKHPHVPDW TLW