Gene Pfl01_3330 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3330 
Symbol 
ID3713222 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3807962 
End bp3809065 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content58% 
IMG OID 
ProductDNA-3-methylpurine glycosylase 
Protein accessionYP_349059 
Protein GI77459552 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones50 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCCA CCGAAACCGC CGCCCCAGCT CTGAAAGAAA TCTTCAACGC CGAACGCCTG 
CAACACATCG CCACTGAAAT GAGCGCCGTG TACCCGGCGT TCAAGGCCAA GGCGTTTCTT
AAACACGTCA ACGAAGGCCT CGCCGACCTC TCCGTCATGC AACGCATGGC CCGCGTCAGC
GAAAGCCTGC ACGCTGTGCT GCCGCTGGAT TACGCAGATT CCCTCGTTAT CCTGCGCGAA
CTTGCCCCAC GCCTGAACAG CGGCTTCGTC AGCATGTGCC TGCCGCACTA CGTCGCGAGC
TACGGCGCGC ACGCGTTCGA CACCTCGATG GAAGCCCTGA AGTACTTCAC CACCTTCGGC
TCCTCCGAAT TCGCCATCCG CCACTTCCTG CGCAGCGACC TGGAACGCTC GCTGGAACTG
ATGCACGACT GGACCCGAAA CGAAAACCAC CACGTCCGAA GACTTGCCAG CGAAGGCAGC
CGCCCTCGCC TGCCGTGGTC ATTTCGGCTG GAACCGGTGC AAGCGGATCC GCTGTTGGCT
GCCGGGATTC TTGATCGGTT GAAAGCCGAT GAGAGTTTGT ACGTGCGCAA GTCCGTGGCG
AATCATTTGA ATGACGTGAC GAAAGAACAT CCGGAGTGGG TGCTGGATAC GATTGAGGGG
TGGTCGCTGG ACAACAAGCA CACGGCGTGG ATTGCCAAAC ATGCGCTACG AAGTTTGATC
AAACAGGGGA ATTCTCGGGC GCTTACGGTT ATAGGCGCTG GGGCGAAGGC TGAGGTTGAG
TTGCTGGATG TGAAGGTGGA GCCGGCGGTT GTGCGGCTTG GGGATACGAT TACCTTGTCA
TTTACCGTTC GATCGTTGGT GCCAGTTGAA CAGCGGCTGG TGATTGATTA TGCGATTGAC
TATGTGAAGG CGAATGGCGG GACGTCGGCC AAGGTTTTCA AGTTGAAGAC GTTGGAGCTG
GAGGGGTTTG GGAGTGCGGT TGTGGCGCGG CGGCAGGTGA TTAAGGATTT CACTACGCGC
AAGCACTATG CGGGGGTGCA TGCGGTGCAT GTGGTGGTTA ATGGGGAGCG GTTGGGGAGT
ACAGCGGTTG ACATCGATTT TTGA
 
Protein sequence
MSATETAAPA LKEIFNAERL QHIATEMSAV YPAFKAKAFL KHVNEGLADL SVMQRMARVS 
ESLHAVLPLD YADSLVILRE LAPRLNSGFV SMCLPHYVAS YGAHAFDTSM EALKYFTTFG
SSEFAIRHFL RSDLERSLEL MHDWTRNENH HVRRLASEGS RPRLPWSFRL EPVQADPLLA
AGILDRLKAD ESLYVRKSVA NHLNDVTKEH PEWVLDTIEG WSLDNKHTAW IAKHALRSLI
KQGNSRALTV IGAGAKAEVE LLDVKVEPAV VRLGDTITLS FTVRSLVPVE QRLVIDYAID
YVKANGGTSA KVFKLKTLEL EGFGSAVVAR RQVIKDFTTR KHYAGVHAVH VVVNGERLGS
TAVDIDF