Gene Pfl01_3310 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3310 
Symbol 
ID3713184 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3790680 
End bp3793580 
Gene Length2901 bp 
Protein Length966 aa 
Translation table11 
GC content64% 
IMG OID 
Productputative monovalent cation/H+ antiporter subunit A 
Protein accessionYP_349039 
Protein GI77459532 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.90946 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCTGA TAGTTCTACT GCTTCTGCCT TTTCTGGGCA GCTGTCTGGC AGCAGTGCTG 
CCGCACAACG CACGTAACGC CGAATCCCTG CTGGCAGGTC TGGTCGCACT GATCGGCACT
GTCTCGGTCG CGCTGCTGTA CCCGCAGATC GCCCACGGCG GCGTGATTCG CGAAGAATTC
ACGTGGCTGC CCAGCCTGGG CCTGAACTTC GTCCTGCGCA TGGACGGCTT CGCCTGGCTG
TTCTCGATGC TGGTGCTGGG CATCGGCACT CTCGTTTCCT TATATGCCCG TTATTACATG
TCGCCGGATG ACCCGGTGCC GCGTTTCTTC GCGTTCTTTC TGGCGTTCAT GGGCGCCATG
CTCGGGCTGG TGATCTCCGG CAACCTGATT CAAATCGTAT TCTTCTGGGA GCTGACCAGC
CTTTTCTCGT TCCTGTTGAT CGGCTACTGG CACCACCGCC ACGACGCCCG GCGCGGCGCC
TATATGGCGT TGATGGTTAC CGGTGCCGGC GGATTGTGCC TGCTGGCGGG GGTCATGATC
CTCGGCCATG TGGTCGGCAG CTATGACCTG GACAAGGTCC TGGCCGCCGG CGATCAGATT
CGCGCACATG CCCTCTACCC CATCCTGCTT CCCCTCATTC TTATCGGCGC CCTCAGCAAA
AGCGCCCAGT TCCCCTTCCA CTTCTGGCTG CCGCACGCCA TGGCGGCACC CACACCGGTT
TCGGCGTACC TGCACTCGGC GACCATGGTC AAGGCCGGTG TTTTCCTGCT GGCCCGTCTG
TGGCCGTCGC TGTCCGGCAG CGAAGAATGG TTCTACATCG TCAGCGGCGC CGGTGCCGCC
ACGCTGTTGC TCGGCGCGTA CTGCGCGATG TTCCAGAACG ATCTCAAGGG ACTGCTGGCC
TACTCGACCA TCAGCCACCT CGGTCTGATC ACGCTGCTGC TGGGCCTGAA CAGTCCGCTC
GCCGCTGTGG CGGCGGTGTT CCACATTCTC AACCACGCGA CCTTCAAGGC CTCGCTGTTC
ATGGCCGCCG GGATCATCGA CCACGAAAGC GGTACCCGCG ATATCCGCAA GCTCAACGGT
CTGTTCAAAC TGATTCCCTT CACCGCCACC CTGGCGATGG TCGCCAGTGC CTCCATGGCC
GGCGTGCCAC TGCTCAACGG TTTCCTGTCC AAGGAAATGT TCTTCGCCGA AACCGTGTTC
ATCAACGCCA CCGCGTGGGT TGAAACCAGC CTGCCGATCG TCGCGACCAT TGCCGGTATG
TTCAGCGTGG CCTATTCGCT GCGTTTCACC GTTGATGTGT TCTTCGGCCC GACTGCCACC
GACCTGCCGC ACACCCCGCA CGAGCCCCCG CGCTGGATGC GTGCGCCGGT GGAACTGCTG
GTGTTCACCT GCCTGCTGGT GGGGATTTTC CCGGCCCAGG TGGTCGGACC GTTGCTGGCC
GCTGCCGCGT TGCCGGTGGT GGGTGGCGTG CTGCCGGAAT ACAGCCTGGC GATCTGGCAC
GGCCTCAATG CACCGATGAT CATGAGCCTG ATCGCCATGT CCGGCGGCAT CGTGGTCTAT
CTGCTACTGC GCAACCAGCT CAAGCGCGGC CGCTTCAAGT ATCCGCCGCT GGCGGGCCGC
CTCAACGGCA AGCGAATGTT CGAACGCAGT CTGGTGGCGA TGATGCGTCT GGCCCGGCGG
CTGGAGCGGA GGATCGGCAC CAAGCGTCTG CAAACCCAGC TGTTCCTGAT GGTGTTGGCG
GCAGTGCTGG CCGGCCTGAT CCCGATGCTG CACAGCAACC TGAGCTGGGG CGACCGGCCG
AAGATCCCGG GCTCGATCGT GTTCGTGACC CTGTGGCTGC TGGCAATCGC CTGCGCCCTC
GGCGCCGCGT GGCAGGCCAA GTATCACCGT CTCGCCGCCC TGACCATGGT CAGCGTCTGC
GGGCTGATGA CCTGCGTGAC GTTCGTCTGG TTCTCGGCGC CGGATCTGGC CCTGACGCAG
CTGGTGGTCG AAGTGGTGAC CACGGTCCTG ATCCTGCTCG GCCTGCGCTG GCTGCCACGG
CGGATCGAAG AGGTTTCGCC GCTGCCAAGC AGCCTGCGCA AGGCGCGAGT ACGCCGTCTG
CGCGACCTGC TGCTGTCGAT TGCCGTCGGC GGCGGCATGG CGCTGCTGTC CTACGCCATG
CTGACCCGGC AGACGCCGAA CGACATTTCC TCGTTCTACC TGAGCCGTGC TCTGCCCGAG
GGCGGCGGCA GCAACGTGGT CAACGTGATG CTGGTGGATT TCCGTGGTTT CGACACCCTC
GGCGAAATCA CGGTGCTCGC CGCCGTGGCA CTGACCGTAT TCGCCCTGCT GCGTCGTTTC
CGCCCACCGA AAGAAAGCCT GCAACTGCCG GCCCAGCAAC GCCTGCTCGC CCCCGATGTG
GTCACCGATC TGGTCAACCC GCGCTCGGCC AGCGACACCG CGCTCGGTTT CATGATGGTG
CCGGCGGTGC TGGTGCGCCT GCTGCTGCCG ATTGCGCTGG TGGTGTCGTT CTACCTGTTC
ATGCGCGGGC ACAACCAGCC GGGTGGCGGC TTCGTCGCCG GTCTGGTGAT GTCGGTGGCG
TTCATCCTGC AATACATGGT CGCCGGCACC CAGTGGGTCG AGGCGCAAAT GAGCCTGCGG
CCGCTGCGCT GGATGGGCAC CGGCCTGCTG TTCGCCACCC TCACCGGCCT CGGGGCAATG
GCGGTCGGTT ATCCGTTCCT GACCACCCAC ACCTGGCATT TCAGCTTGCC GCTGCTGGGT
GACATCCATA TCGCCAGCGC GCTGTTCTTC GATATCGGCG TCTACGCCGT GGTGGTCGGC
TCGACCTTGC TGATCCTCAC CGCCCTCGCC CACCAATCGG TCCGGGGCCA CAAAACCGCT
GCCGCCAAAG GAGCCGTCTG A
 
Protein sequence
MSLIVLLLLP FLGSCLAAVL PHNARNAESL LAGLVALIGT VSVALLYPQI AHGGVIREEF 
TWLPSLGLNF VLRMDGFAWL FSMLVLGIGT LVSLYARYYM SPDDPVPRFF AFFLAFMGAM
LGLVISGNLI QIVFFWELTS LFSFLLIGYW HHRHDARRGA YMALMVTGAG GLCLLAGVMI
LGHVVGSYDL DKVLAAGDQI RAHALYPILL PLILIGALSK SAQFPFHFWL PHAMAAPTPV
SAYLHSATMV KAGVFLLARL WPSLSGSEEW FYIVSGAGAA TLLLGAYCAM FQNDLKGLLA
YSTISHLGLI TLLLGLNSPL AAVAAVFHIL NHATFKASLF MAAGIIDHES GTRDIRKLNG
LFKLIPFTAT LAMVASASMA GVPLLNGFLS KEMFFAETVF INATAWVETS LPIVATIAGM
FSVAYSLRFT VDVFFGPTAT DLPHTPHEPP RWMRAPVELL VFTCLLVGIF PAQVVGPLLA
AAALPVVGGV LPEYSLAIWH GLNAPMIMSL IAMSGGIVVY LLLRNQLKRG RFKYPPLAGR
LNGKRMFERS LVAMMRLARR LERRIGTKRL QTQLFLMVLA AVLAGLIPML HSNLSWGDRP
KIPGSIVFVT LWLLAIACAL GAAWQAKYHR LAALTMVSVC GLMTCVTFVW FSAPDLALTQ
LVVEVVTTVL ILLGLRWLPR RIEEVSPLPS SLRKARVRRL RDLLLSIAVG GGMALLSYAM
LTRQTPNDIS SFYLSRALPE GGGSNVVNVM LVDFRGFDTL GEITVLAAVA LTVFALLRRF
RPPKESLQLP AQQRLLAPDV VTDLVNPRSA SDTALGFMMV PAVLVRLLLP IALVVSFYLF
MRGHNQPGGG FVAGLVMSVA FILQYMVAGT QWVEAQMSLR PLRWMGTGLL FATLTGLGAM
AVGYPFLTTH TWHFSLPLLG DIHIASALFF DIGVYAVVVG STLLILTALA HQSVRGHKTA
AAKGAV