Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_3310 |
Symbol | |
ID | 3713184 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 3790680 |
End bp | 3793580 |
Gene Length | 2901 bp |
Protein Length | 966 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | |
Product | putative monovalent cation/H+ antiporter subunit A |
Protein accession | YP_349039 |
Protein GI | 77459532 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.90946 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCCTGA TAGTTCTACT GCTTCTGCCT TTTCTGGGCA GCTGTCTGGC AGCAGTGCTG CCGCACAACG CACGTAACGC CGAATCCCTG CTGGCAGGTC TGGTCGCACT GATCGGCACT GTCTCGGTCG CGCTGCTGTA CCCGCAGATC GCCCACGGCG GCGTGATTCG CGAAGAATTC ACGTGGCTGC CCAGCCTGGG CCTGAACTTC GTCCTGCGCA TGGACGGCTT CGCCTGGCTG TTCTCGATGC TGGTGCTGGG CATCGGCACT CTCGTTTCCT TATATGCCCG TTATTACATG TCGCCGGATG ACCCGGTGCC GCGTTTCTTC GCGTTCTTTC TGGCGTTCAT GGGCGCCATG CTCGGGCTGG TGATCTCCGG CAACCTGATT CAAATCGTAT TCTTCTGGGA GCTGACCAGC CTTTTCTCGT TCCTGTTGAT CGGCTACTGG CACCACCGCC ACGACGCCCG GCGCGGCGCC TATATGGCGT TGATGGTTAC CGGTGCCGGC GGATTGTGCC TGCTGGCGGG GGTCATGATC CTCGGCCATG TGGTCGGCAG CTATGACCTG GACAAGGTCC TGGCCGCCGG CGATCAGATT CGCGCACATG CCCTCTACCC CATCCTGCTT CCCCTCATTC TTATCGGCGC CCTCAGCAAA AGCGCCCAGT TCCCCTTCCA CTTCTGGCTG CCGCACGCCA TGGCGGCACC CACACCGGTT TCGGCGTACC TGCACTCGGC GACCATGGTC AAGGCCGGTG TTTTCCTGCT GGCCCGTCTG TGGCCGTCGC TGTCCGGCAG CGAAGAATGG TTCTACATCG TCAGCGGCGC CGGTGCCGCC ACGCTGTTGC TCGGCGCGTA CTGCGCGATG TTCCAGAACG ATCTCAAGGG ACTGCTGGCC TACTCGACCA TCAGCCACCT CGGTCTGATC ACGCTGCTGC TGGGCCTGAA CAGTCCGCTC GCCGCTGTGG CGGCGGTGTT CCACATTCTC AACCACGCGA CCTTCAAGGC CTCGCTGTTC ATGGCCGCCG GGATCATCGA CCACGAAAGC GGTACCCGCG ATATCCGCAA GCTCAACGGT CTGTTCAAAC TGATTCCCTT CACCGCCACC CTGGCGATGG TCGCCAGTGC CTCCATGGCC GGCGTGCCAC TGCTCAACGG TTTCCTGTCC AAGGAAATGT TCTTCGCCGA AACCGTGTTC ATCAACGCCA CCGCGTGGGT TGAAACCAGC CTGCCGATCG TCGCGACCAT TGCCGGTATG TTCAGCGTGG CCTATTCGCT GCGTTTCACC GTTGATGTGT TCTTCGGCCC GACTGCCACC GACCTGCCGC ACACCCCGCA CGAGCCCCCG CGCTGGATGC GTGCGCCGGT GGAACTGCTG GTGTTCACCT GCCTGCTGGT GGGGATTTTC CCGGCCCAGG TGGTCGGACC GTTGCTGGCC GCTGCCGCGT TGCCGGTGGT GGGTGGCGTG CTGCCGGAAT ACAGCCTGGC GATCTGGCAC GGCCTCAATG CACCGATGAT CATGAGCCTG ATCGCCATGT CCGGCGGCAT CGTGGTCTAT CTGCTACTGC GCAACCAGCT CAAGCGCGGC CGCTTCAAGT ATCCGCCGCT GGCGGGCCGC CTCAACGGCA AGCGAATGTT CGAACGCAGT CTGGTGGCGA TGATGCGTCT GGCCCGGCGG CTGGAGCGGA GGATCGGCAC CAAGCGTCTG CAAACCCAGC TGTTCCTGAT GGTGTTGGCG GCAGTGCTGG CCGGCCTGAT CCCGATGCTG CACAGCAACC TGAGCTGGGG CGACCGGCCG AAGATCCCGG GCTCGATCGT GTTCGTGACC CTGTGGCTGC TGGCAATCGC CTGCGCCCTC GGCGCCGCGT GGCAGGCCAA GTATCACCGT CTCGCCGCCC TGACCATGGT CAGCGTCTGC GGGCTGATGA CCTGCGTGAC GTTCGTCTGG TTCTCGGCGC CGGATCTGGC CCTGACGCAG CTGGTGGTCG AAGTGGTGAC CACGGTCCTG ATCCTGCTCG GCCTGCGCTG GCTGCCACGG CGGATCGAAG AGGTTTCGCC GCTGCCAAGC AGCCTGCGCA AGGCGCGAGT ACGCCGTCTG CGCGACCTGC TGCTGTCGAT TGCCGTCGGC GGCGGCATGG CGCTGCTGTC CTACGCCATG CTGACCCGGC AGACGCCGAA CGACATTTCC TCGTTCTACC TGAGCCGTGC TCTGCCCGAG GGCGGCGGCA GCAACGTGGT CAACGTGATG CTGGTGGATT TCCGTGGTTT CGACACCCTC GGCGAAATCA CGGTGCTCGC CGCCGTGGCA CTGACCGTAT TCGCCCTGCT GCGTCGTTTC CGCCCACCGA AAGAAAGCCT GCAACTGCCG GCCCAGCAAC GCCTGCTCGC CCCCGATGTG GTCACCGATC TGGTCAACCC GCGCTCGGCC AGCGACACCG CGCTCGGTTT CATGATGGTG CCGGCGGTGC TGGTGCGCCT GCTGCTGCCG ATTGCGCTGG TGGTGTCGTT CTACCTGTTC ATGCGCGGGC ACAACCAGCC GGGTGGCGGC TTCGTCGCCG GTCTGGTGAT GTCGGTGGCG TTCATCCTGC AATACATGGT CGCCGGCACC CAGTGGGTCG AGGCGCAAAT GAGCCTGCGG CCGCTGCGCT GGATGGGCAC CGGCCTGCTG TTCGCCACCC TCACCGGCCT CGGGGCAATG GCGGTCGGTT ATCCGTTCCT GACCACCCAC ACCTGGCATT TCAGCTTGCC GCTGCTGGGT GACATCCATA TCGCCAGCGC GCTGTTCTTC GATATCGGCG TCTACGCCGT GGTGGTCGGC TCGACCTTGC TGATCCTCAC CGCCCTCGCC CACCAATCGG TCCGGGGCCA CAAAACCGCT GCCGCCAAAG GAGCCGTCTG A
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Protein sequence | MSLIVLLLLP FLGSCLAAVL PHNARNAESL LAGLVALIGT VSVALLYPQI AHGGVIREEF TWLPSLGLNF VLRMDGFAWL FSMLVLGIGT LVSLYARYYM SPDDPVPRFF AFFLAFMGAM LGLVISGNLI QIVFFWELTS LFSFLLIGYW HHRHDARRGA YMALMVTGAG GLCLLAGVMI LGHVVGSYDL DKVLAAGDQI RAHALYPILL PLILIGALSK SAQFPFHFWL PHAMAAPTPV SAYLHSATMV KAGVFLLARL WPSLSGSEEW FYIVSGAGAA TLLLGAYCAM FQNDLKGLLA YSTISHLGLI TLLLGLNSPL AAVAAVFHIL NHATFKASLF MAAGIIDHES GTRDIRKLNG LFKLIPFTAT LAMVASASMA GVPLLNGFLS KEMFFAETVF INATAWVETS LPIVATIAGM FSVAYSLRFT VDVFFGPTAT DLPHTPHEPP RWMRAPVELL VFTCLLVGIF PAQVVGPLLA AAALPVVGGV LPEYSLAIWH GLNAPMIMSL IAMSGGIVVY LLLRNQLKRG RFKYPPLAGR LNGKRMFERS LVAMMRLARR LERRIGTKRL QTQLFLMVLA AVLAGLIPML HSNLSWGDRP KIPGSIVFVT LWLLAIACAL GAAWQAKYHR LAALTMVSVC GLMTCVTFVW FSAPDLALTQ LVVEVVTTVL ILLGLRWLPR RIEEVSPLPS SLRKARVRRL RDLLLSIAVG GGMALLSYAM LTRQTPNDIS SFYLSRALPE GGGSNVVNVM LVDFRGFDTL GEITVLAAVA LTVFALLRRF RPPKESLQLP AQQRLLAPDV VTDLVNPRSA SDTALGFMMV PAVLVRLLLP IALVVSFYLF MRGHNQPGGG FVAGLVMSVA FILQYMVAGT QWVEAQMSLR PLRWMGTGLL FATLTGLGAM AVGYPFLTTH TWHFSLPLLG DIHIASALFF DIGVYAVVVG STLLILTALA HQSVRGHKTA AAKGAV
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