Gene Pfl01_3309 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3309 
Symbol 
ID3713183 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3789623 
End bp3790573 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content61% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_349038 
Protein GI77459531 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.249061 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCAAGG TCATGACGTC AGCCAACTCC CCTCAAACTC CCCTGCGGTT TTCCCGGTTC 
AGCAAAGCCG AGTGCGTGCT GGTGTTGATC ACCATGCTTT GGGGCGGCAC CTTCCTGCTG
GTGCAGCACG CGATGACCGT CAGCGGCCCG ATGTTTTTCG TCGGCCTGCG CTTTGCCGCC
GCAGCTGGCA TTGTTGCGCT GTTCTCCTGG AAACACCTGC GAGAACTGAC CCTGTTCGAA
TTCAAGGCTG GCGCCTTTAT CGGCGTGGCG ATCCTGCTCG GTTATGGCTT GCAGACCGTT
GGGTTGCAGA GTATCCCAAG CAGTCAGTCA GCGTTCATAA CCGCGCTGTA CGTGCCGTTC
GTGCCGCTGT TGCAATGGCT GGTGCTGGGC CGGCGCCCGG GTTTGATGCC GAGCATCGGC
ATCATGCTGG CGTTTACCGG GCTGATGCTG CTTTCCGGGC CGTCCGGTGC TTCGCTGAAT
TTCAGCCCCG GTGAAATCGC CACGCTGATC AGCGCCATTG CGATAGCGGC CGAAATCATC
CTGATCAGCA ACTATGCCGG GCAAGTCGAT GTGCGCCGGG TAACCGTGGT GCAGCTGGCG
ACGACTTCGG TGCTGTCGTT TTTGATGGTA GTGCCGACCG GCGAGGCGAT TCCGGATTTC
TCGTGGTTGT TGCTGAGCAC CGCCCTGGGC CTGGGCGCTA TGAGTGCGGC GATTCAGGTG
GCGATGAACT GGGCGCAGAA AAGTGTTTCG CCGACCCGCG CAACCTTGAT CTACGCCGGT
GAGCCGGTGT GGGCCGGGAT CGTCGGGCGC ATCGCGGGGG AGCGTTTGCC AGCGATTGCA
TTGGTAGGTG CGGGGCTGAT CGTGGCGGCG GTGATCGTGA GTGAATTGAA GACCAAAGAC
AAAGAGACAC AAACGGTCAC GGAAGAATTG GAGCACGAGA CCGAAGGCTA A
 
Protein sequence
MRKVMTSANS PQTPLRFSRF SKAECVLVLI TMLWGGTFLL VQHAMTVSGP MFFVGLRFAA 
AAGIVALFSW KHLRELTLFE FKAGAFIGVA ILLGYGLQTV GLQSIPSSQS AFITALYVPF
VPLLQWLVLG RRPGLMPSIG IMLAFTGLML LSGPSGASLN FSPGEIATLI SAIAIAAEII
LISNYAGQVD VRRVTVVQLA TTSVLSFLMV VPTGEAIPDF SWLLLSTALG LGAMSAAIQV
AMNWAQKSVS PTRATLIYAG EPVWAGIVGR IAGERLPAIA LVGAGLIVAA VIVSELKTKD
KETQTVTEEL EHETEG