| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_3294 |
|---|
| Symbol | |
|---|
| ID | 3713168 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | + |
|---|
| Start bp | 3777753 |
|---|
| End bp | 3778739 |
|---|
| Gene Length | 987 bp |
|---|
| Protein Length | 328 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | |
|---|
| Product | ABC transporter, substrate-binding protein, aliphatic sulphonates |
|---|
| Protein accession | YP_349023 |
|---|
| Protein GI | 77459516 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 55 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAATTCC TCTTACCGTT TTCCCGCTTC AAAACGCTGC TCGCGGCCTG CGCAGTAGCC
CTGAGCCTGC AACCGCTCGC CCACGCTGCC GAAGCGCCGC CGGCCGAAGT GCATCTGGAT
TACGCCTATT ACTCGCCGGT CAGCCTGGCG CTGAAACATC TGGGCTACCT GGAAAAAGCC
CTGCCCCAGA GCAAAGTCAG CTGGGTGCTG AGCCAGGGCA GCAACCGCTC GCTGGAATAC
CTGAACAGCG GCGGCGTGGA TTTCGCCTCT TCGGCCAGCC TCGCCGCCGT GCTCAGCCGC
GCCAATGGCA GCCCGATCAA ATCGGTCTAC GTCTACAGCC GCGCCGAATG GACCGCGCTG
GTGGTGCGCA AGGACTCGCC GATCCAGTCC GTCGCCGACC TCAAGGGCAA GAAAATCGCC
GCCACCAAGG GCACCGATCC GTATCTGTTC ACCCTGCGCA CCCTGCAACA GGCCGGGCTG
AAAAAGGACG ACCTGGAACT GGTGCATCTG CAACACCCGG ACGGTCGCAC CGCGTTGGAG
AAAGGCGATG TCGACGCCTG GGCCGGTCTT GATCCGCACA TGGCCGCCAG TCAGGTACAG
GCCGGTTCGC GCCTGCTGTA CCGCAATCGC GATTTCAACA GTTACGGCGT GGTCAGCGTC
ACCGAGCAAT ACGCCAAGCA ACACCCGCAA ACCATCGACA CCGTGATCAA GGCCTATGAG
CAGGCCCGCG AGTGGTCGGT GAAGAACCCC GAAGAGCTGG CAAAGTTGCT CGCCAGCGAA
TCCGGCCTGC CGCTGGACGT GGCCAAGCTG CAACTGTCGC GCACCGACCT GAGCAGCCCG
CAACTGACCG CCAAGGACGT GCTGGCCTCG AAAGCCGCCG CGCCGATTCT GGTCTCCGAA
GAACTGGTGC GCCGTGGGGT GAATGTCGAT CAGGTCATCG ATCAGTTGAT CGACACCGGT
TTCCAGCAAG TCGCCGCCGC CCAGTAA
|
|---|
| Protein sequence | MKFLLPFSRF KTLLAACAVA LSLQPLAHAA EAPPAEVHLD YAYYSPVSLA LKHLGYLEKA
LPQSKVSWVL SQGSNRSLEY LNSGGVDFAS SASLAAVLSR ANGSPIKSVY VYSRAEWTAL
VVRKDSPIQS VADLKGKKIA ATKGTDPYLF TLRTLQQAGL KKDDLELVHL QHPDGRTALE
KGDVDAWAGL DPHMAASQVQ AGSRLLYRNR DFNSYGVVSV TEQYAKQHPQ TIDTVIKAYE
QAREWSVKNP EELAKLLASE SGLPLDVAKL QLSRTDLSSP QLTAKDVLAS KAAAPILVSE
ELVRRGVNVD QVIDQLIDTG FQQVAAAQ
|
|---|
| |