Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_3284 |
Symbol | |
ID | 3713138 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 3769769 |
End bp | 3771136 |
Gene Length | 1368 bp |
Protein Length | 455 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | |
Product | major facilitator transporter |
Protein accession | YP_349013 |
Protein GI | 77459506 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.861577 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAAAAACC TCCAGAGTTC GCCGGACATC ACGGTACTCG CCCGCGCTGC CGCCAAGGTC AAGCGCCATG TGCTGCCGTT GTTCGTGGTG ATGTTCATCG TCAACTACAT CGACCGGGTC AACATCGGTT TCGTGCGCAG TCATCTGGAA ACCGATCTGG GTATCGGTGC TGCCGCCTAT GGCCTTGGCG CCGGTCTGTT TTTCATCGGT TACGCCTTGT TTGAAGTGCC GTCCAACATG CTTCTGCAAC GCTACGGCGC CCGCGCCTGG CTGACGCGGA TCATGTTCAC CTGGGGCGCA GCGGCGATGG CCATGGCGTT CGTCAAAGGC GAAACCAGTT TCTACGTGCT GCGCTTCATC CTGGGCGCTG CCGAAGCCGG CTTCTTCCCG GGGATCATTT ATTACTTCAC CCAATGGCTG CCGGCTTCTG AACGCGGCAA GACCATGGCG GTATTTCTCA GCGGGTCGGC GATTGCTTCG GTGATATCCG GTCCGGTGTC CGGCGCGTTG TTGCATATCA GCGGCCTGGG CATGCACGGC TGGCAGTGGA TGTTCCTGAT CGAAGGCGCT GCGTCGGTGG TGCTCTGCGG GTTTGTCTGG TTCTGGCTGC AATCCCATCC GCGCCAGGCC AAGTGGCTGA CCGAAGAGGA GCGTGAAGCG CTGGTGACGG CAATCGCCGA GGAACAACGT GCCCGCGAAG CGACCCGCGT CGCCAAACCA TCGATGTTCA AACTGTTGGC GGATCGGCAG ATCGCATTGT TCTGCTTCAT CTACTTCTCC ATCGCCCTGA CCATCTACGG CGCCACCTTC TGGCTGCCGA GCATGATCAA GAAAATGGGC AACCTCGGCG ACTTCCAGGT CGGGCTGCTC AACTCGGTGC CGTGGATCAT TTCCATCGTC GCGATGTACG GCTTTGCGGC GCTGGCGGGC AAGTGGAAAT TCCAGCAGGC CTGGGTCGCA CTGACCCTGG TGATCGCCGC ATTCGGCATG TTCATGTCCA CCACCGGCGG GCCGATTTTC GCCTTCGTCG CGATCTGTTT TGCGGCCATC GGTTTCAAGG CGGCTTCGGC ACTGTTCTGG CCGATTCCGC AGAGCTATCT GGATGCGCGC ATCGCGGCGG CAGTCATTGC TCTGATCAAC TCCATCGGCA ACCTCGGCGG CTTCGTTGCG CCGACCGCGT TCGGTTTTCT GGAACAGACC ACCGGCTCTA TCGAGGGCGG TCTGTATGGC CTGGCCGCGA CTTCGCTGAT AGCGGCGGTG GTGATCTTCT TCGCCCGCAT GGCGCCCGGC GCCAAAGGCA ACACCCCGGC AAAGCCTGAA CCCGAAACCG CCGTTGCGCC GACGGCCAAC CCGCTGGCGA GCCACTGA
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Protein sequence | MKNLQSSPDI TVLARAAAKV KRHVLPLFVV MFIVNYIDRV NIGFVRSHLE TDLGIGAAAY GLGAGLFFIG YALFEVPSNM LLQRYGARAW LTRIMFTWGA AAMAMAFVKG ETSFYVLRFI LGAAEAGFFP GIIYYFTQWL PASERGKTMA VFLSGSAIAS VISGPVSGAL LHISGLGMHG WQWMFLIEGA ASVVLCGFVW FWLQSHPRQA KWLTEEEREA LVTAIAEEQR AREATRVAKP SMFKLLADRQ IALFCFIYFS IALTIYGATF WLPSMIKKMG NLGDFQVGLL NSVPWIISIV AMYGFAALAG KWKFQQAWVA LTLVIAAFGM FMSTTGGPIF AFVAICFAAI GFKAASALFW PIPQSYLDAR IAAAVIALIN SIGNLGGFVA PTAFGFLEQT TGSIEGGLYG LAATSLIAAV VIFFARMAPG AKGNTPAKPE PETAVAPTAN PLASH
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