Gene Pfl01_3283 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3283 
Symbol 
ID3713137 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3768470 
End bp3769744 
Gene Length1275 bp 
Protein Length424 aa 
Translation table11 
GC content60% 
IMG OID 
Productmandelate racemase/muconate lactonizing protein 
Protein accessionYP_349012 
Protein GI77459505 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.686911 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.91746 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAAATCA CTCGCGTAAC CGTCACTCCG ATTGCCTTCC GTGATCCGCC GCTGCTCAAC 
GCCAGTGGCA TCCACGAACC GTTCGCCCTG CGCTCGATCA TCGAGATCGA GAGTGACAAC
GGCTACATCG GCCTCGGCGA AAGCTATGGC GATGCCCCGG CGCTGGCGAT CCAGCAACAG
GTGCAGTCGC AGTTGATCGG CCTCGATCCG TTTAATCTTA ATCAGCTGCG TCGGATCGTT
CAGACCACGG TTGCCGCACA CAAACCGGCC AGTCTGGCGG GTGCCGAACT GGCGCCCGGT
TCCCACGCCA GCAAGGCCGT CAGCAATGCG TATTCGGCGT TCGAAGTGGC GTTTCTCGAC
TTGCAGGCTC GTTACCTGAA TGTGCCGTTG GTGGATCTGC TGGGCGGGGC GGTGCGCGAC
GAAGTACCGT TCAGCGCCTA CCTGTTTTTC AAGTACGCGC AACACGTCGA TTCACCCTAC
AAACCGGACA ACTGGGGCGA GGCGCTGAAC GAACAGCAGA TCGTCGCCCA GGCCGCGCGA
ATGATCGAGG CGTACGGTTT CAAGAGCATC AAGCTCAAGG CCGGCACGTT GCCGCCGGAA
CATGAAGTGG CATGCATCAA GGCGCTGAAA AAGGCCTTCC CCGGTTATCC GCTGCGCATC
GATCCCAACG GCAACTGGTC GCTGGAAACC TCGATCCGCA TGGCCGAGTT GCTGGGCGAC
GATCTGCAGT ATTACGAAGA CCCGACCCCG GGCCTCGAAG GAATGGCCGA GCTGCACAAA
CGCACCGGGC TGCCGCTGGC CACCAACATG GTGGTCACTG ATTTCGACGA GTTCCGCCGC
AGCGTGGCGC AGAACAGCGT GCAGATCGTA CTCGCCGATC ACCATTACTG GGGCGGTCTG
CGCGACACCC AGACTCTGGC GAAAATGTGT GACACCTTCG GCCTCGGCGT GTCGATGCAT
TCCAACTCAC ACCTGGGCAT CAGCCTTATG GCCATGGCGC ACGTGGCGGC TGCGGTACCG
AATCTGGATT ACGCGTGCGA CACCCATTAT CCGTGGCAGG AGCCGGATGA AGAGGTGATC
AAGGGCGGCA AGCTGCCGAT TGTCGATGGC TGCGTGAAGA TCACGCGTGC GCCGGGCCTG
GGGCTGGAAC TGGATCACGA TCAACTGGGC AAGCTGCATG ACCAGTACCT GACCTGCGGC
ATTCGCCAGC GCGATGATGT GCGGCAGATG CAACGCTATA AACCTGACTG GAAAGCGCTG
AAGCCACGAT TCTGA
 
Protein sequence
MKITRVTVTP IAFRDPPLLN ASGIHEPFAL RSIIEIESDN GYIGLGESYG DAPALAIQQQ 
VQSQLIGLDP FNLNQLRRIV QTTVAAHKPA SLAGAELAPG SHASKAVSNA YSAFEVAFLD
LQARYLNVPL VDLLGGAVRD EVPFSAYLFF KYAQHVDSPY KPDNWGEALN EQQIVAQAAR
MIEAYGFKSI KLKAGTLPPE HEVACIKALK KAFPGYPLRI DPNGNWSLET SIRMAELLGD
DLQYYEDPTP GLEGMAELHK RTGLPLATNM VVTDFDEFRR SVAQNSVQIV LADHHYWGGL
RDTQTLAKMC DTFGLGVSMH SNSHLGISLM AMAHVAAAVP NLDYACDTHY PWQEPDEEVI
KGGKLPIVDG CVKITRAPGL GLELDHDQLG KLHDQYLTCG IRQRDDVRQM QRYKPDWKAL
KPRF