Gene Pfl01_3280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3280 
Symbol 
ID3713134 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3763069 
End bp3764292 
Gene Length1224 bp 
Protein Length407 aa 
Translation table11 
GC content62% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_349009 
Protein GI77459502 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.515764 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.176654 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGCCGC TTTCGGGCGG TCGCATCGAT CAACCTTTCG ATTGCGATAC CTCCATGACG 
ATTGCGGTTC CCCGTTCTGC CCCCTCGGCG ACTGGCCGGT TGCTGTCCAT TGATGCGCTG
CGTGGCCTGG TGATTCTGTT CATGTTGCTG GACCACGTGC GCGAAACCTT TCTGCTGCAT
CGTCAGGTCT CCGACCCGAT GGACATCGCC ATCACCGAGC CGGCGCTGTT CTTCAGCCGT
ACCCTGGCGC ATCTGTGCGC GCCGGTGTTC GTGCTGCTGA CCGGGTTGTC GGCGTGGCTG
TTCGGCGAGA AGTACGACGG CAAGGCTGAC GTCAGTGCCT TCCTGTTCAA GCGCGGACTG
TTTCTGGTCG CGCTCGAATT CACTCTGGTG AATTTCGCCT GGACGTTCCA GTTGCCACCG
ACCGTGATCT ACCTGCAAGT GATATGGGCG ATCGGCCTGA GCATGATCGC GTTGTCGCTG
CTGGTCTGGC TGCCACGCTG GCTGTTGTTG ACGCTGAGCC TGACGATCAT CGCCGGGCAC
AACCTGCTCG ACGGACTGCA CTTCGCAACC GAGTCAGCGC TGCACGTGCC GTGGGCAATC
CTGCATGACC GCGGCTGGAT CGAGGCGGGC GAGACCTTGC GCCTGCGCAC CTCGTACCCG
TTGCTGCCGT GGATCGGCGT GATCGGGCTG GGTTACGCGC TGGGGCCGTG GTTCGCTCGC
GCAGCCGATG CCGGCGTGCG CCAGCGCCGT TTATTGATCG GTGGTGTCGC CGGGCTGCTG
GGCTTTGTGG CACTGCGGCT GGTCAACGGT TACGGCGAGA AACCCTGGGC CTTGGGTGAC
AGCGGTGTGC AAACCCTGAT GAGCTTTTTC AACATCACCA AATACCCACC GTCGCTGTTG
TTCATCACGT TGACGGTGAG CGTCGGGCTG CTGCTGTTGC TGGTGTTCGA GCGCGCGCAG
GATCGACGCT TGATTCGCTG GCTGACGGTG TTCGGTTCGG CACCGATGTT TTTTTACCTG
CTGCACTTGT ATGCGCTGAA GGTGCTGTAC CTGATCGGCG TGGCGCTGTT CGGGCTCAAT
CAGGGCACCT ATTTCGGTTT CTCGTCGGTG ACGGCGGTGT GGCTGGCGGC GATGGTGCTG
GCGGTCGCGT TGTTCCCGGC CGTGCGCTGG TTTTCGGCAT TGAAGGCCCG GCGTCGCGAC
ATTGCCTGGT TGAAGTATTT GTAA
 
Protein sequence
MWPLSGGRID QPFDCDTSMT IAVPRSAPSA TGRLLSIDAL RGLVILFMLL DHVRETFLLH 
RQVSDPMDIA ITEPALFFSR TLAHLCAPVF VLLTGLSAWL FGEKYDGKAD VSAFLFKRGL
FLVALEFTLV NFAWTFQLPP TVIYLQVIWA IGLSMIALSL LVWLPRWLLL TLSLTIIAGH
NLLDGLHFAT ESALHVPWAI LHDRGWIEAG ETLRLRTSYP LLPWIGVIGL GYALGPWFAR
AADAGVRQRR LLIGGVAGLL GFVALRLVNG YGEKPWALGD SGVQTLMSFF NITKYPPSLL
FITLTVSVGL LLLLVFERAQ DRRLIRWLTV FGSAPMFFYL LHLYALKVLY LIGVALFGLN
QGTYFGFSSV TAVWLAAMVL AVALFPAVRW FSALKARRRD IAWLKYL