| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_3278 |
|---|
| Symbol | |
|---|
| ID | 3713132 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | - |
|---|
| Start bp | 3761195 |
|---|
| End bp | 3762025 |
|---|
| Gene Length | 831 bp |
|---|
| Protein Length | 276 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | |
|---|
| Product | Short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_349007 |
|---|
| Protein GI | 77459500 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.28535 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.153995 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTACCT GGCTGATTAC CGGAGCTTCC CGTGGTTTTG GCACCCTTAT CGCTGAACAG
GCCCTGCGTG CCGGTGACGC GGTGATTGCC ACCGCCCGCA ACCCGCAAGA CATCACCGAC
CGCCTCGGCG ATCACCCGAA CCTGCTGGCG GTGCGCCTGG ATGTCACCCG CGAAGAGGAA
GCCCACCAAG CGGTGGCAGA AGGCATCAAG CGCTTCGGTC GCATCGACGT GCTGATCAAC
AATGCCGGCT TCGGCGTGTT GGGCGCCGTC GAAGAAACCA GCGCCAGCGA AACCGAGCGC
CTGTTCGCCA CCAACGTGTT CGGTCTGCTC AACGTCACCC GCGCCGTGCT GCCGCACATG
CGCGCCCAGC GCAGTGGACG GGTCATCAAT ATCTCGTCGA TTGGCGGTTA TCAGGCCTAC
GTGGGCTGGG GTGTCTACGG CTCGACCAAG TTCGCAGTGG AAGGCATCAG CGAAGCGCTG
CATCAGGAAC TGGCGCCGCT GGGCATTCAT GCCACGGTGG TCGAACCGGG CTTCTTCCGC
ACTGACTTCC TCGACGAACA GTCGCTGGTC AAGACCGCAT TGGTGCTGCC GGACTACGAC
GAAACCGTCG GCAAGATGCG CACCTTTGCC GAAGCGGCCA ACCATGCGCA ACCGGGCGAT
CCGCAGAAGT TTGCCGAAGC GATGCTGGCG CTGGTCAACG CACCGAACCC GCCGCAGCGT
CTGGCGCTGG GCAGCGACAC GGTTGCACGA ATCGAGGCGA AGAACCGCTT GGTGGTGCAG
GAATTGGCCG AGTGGAATGA GCTGGCGCTG TCCACGGATT TCAAGGACTG A
|
|---|
| Protein sequence | MRTWLITGAS RGFGTLIAEQ ALRAGDAVIA TARNPQDITD RLGDHPNLLA VRLDVTREEE
AHQAVAEGIK RFGRIDVLIN NAGFGVLGAV EETSASETER LFATNVFGLL NVTRAVLPHM
RAQRSGRVIN ISSIGGYQAY VGWGVYGSTK FAVEGISEAL HQELAPLGIH ATVVEPGFFR
TDFLDEQSLV KTALVLPDYD ETVGKMRTFA EAANHAQPGD PQKFAEAMLA LVNAPNPPQR
LALGSDTVAR IEAKNRLVVQ ELAEWNELAL STDFKD
|
|---|
| |