Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_3268 |
Symbol | |
ID | 3713103 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 3749965 |
End bp | 3750642 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_348997 |
Protein GI | 77459490 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.282091 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.0348053 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACATTTT CCATCGCCGC CCGTTGCCCC GAAACCGGCC AGTTCGGCAT CGCCATCAGT TCCTCCAGCA TCGCCGTCGG CGCCCGCTGC CCTTGGTTGT TGCCGGGTGT TGGCGCGGTG TCGAGCCAGA ACATCACCCT GCCGTCGCTC GGTCCGGAAG TGCTCGCTTT GATGGAGCAA GGCCTGGCAC CCGAGGCTGC ACTGGACAAG GTGCTGACCC GCAACGGCTA CAGTCAGTAC CGGCAGATCA CGGCGATCAA TCACCTCGGC CAGACCGCGC ATTTCAGCGG CGCGCAGACC CTCGGCGTGC ACAACGCCGT ATCCGGCGAG CAATGCGTGG CAGCCGGCAA CATGCTCGCC GGGCGCTCGG TGATCGAAGC CATGGTCAGC GCGTTCGAAG AAGGCGAAGG CCAGTTGGCC GATCGCCTGA TCAACGCCCT GCACGCCGCC CAGGCCCTGG GTGGTGAAGC AGGTCCGGTG CATTCGGCAG CGGTGGTCGT GGTGGGTGAA CTGACCTGGC CCATCGTCAA CCTGCGGGTG GACTGGGCCG ATGCAGACCC GATCGGCCAA TTGCAAAAAC TCTGGGACGC CTATTGCCCG CAGCTTCAGG ACTACATCGA CCGCGCCCTC GATCCGGCCA AGGCGCCGGG CTACGGAGTT GCCGGAGACG ACCGATGA
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Protein sequence | MTFSIAARCP ETGQFGIAIS SSSIAVGARC PWLLPGVGAV SSQNITLPSL GPEVLALMEQ GLAPEAALDK VLTRNGYSQY RQITAINHLG QTAHFSGAQT LGVHNAVSGE QCVAAGNMLA GRSVIEAMVS AFEEGEGQLA DRLINALHAA QALGGEAGPV HSAAVVVVGE LTWPIVNLRV DWADADPIGQ LQKLWDAYCP QLQDYIDRAL DPAKAPGYGV AGDDR
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