Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_3257 |
Symbol | |
ID | 3713092 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 3737776 |
End bp | 3739488 |
Gene Length | 1713 bp |
Protein Length | 570 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | |
Product | amidase |
Protein accession | YP_348986 |
Protein GI | 77459479 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.325016 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATCGAAG TCACTGAAGT TTCCATTGCC CAATTGCGCG CGGCGCTCGA ATCCGGCCAG ACCACGGCGG TTGAACTGGT GCAGGCTTAT CTGGCGCGCA TCGACGCCTA TGACGGTCCG GACACCGCTA CGGCCCTGAA TGCGGTGATC GTGCGCAACC CCGACGCGCT GAAAGAAGCG CAGGCCTCCG ATGCCCGCCG TGCCAAAGGC GAAACCCTCG GTCCACTGGA CGGCATCCCC TACACCGCCA AAGACAGCTA TCTGGTCAAA GGCCTGACCG CCGCGTCCGG CAGCCCGGCC TTCGTTGATC TGGTGGCCCA GCGCGATGCG TTCACCATCG AGCGCCTGCG CGCGGGCGGC GCTATCTGCC TGGGCAAGAC CAACATGCCG CCAATGGCCA ATGGCGGGAT GCAGCGCGGC GTCTATGGCC GGGCTGAAAG CCCGTATAAC GCTGATTATC TGACTGCGCC GTTTGCTTCC GGCTCGTCGA ACGGTGCCGG CACCGCCACC GCTGCCAGTT TCTCGGCCTT CGGTCTGGCA GAAGAAACCT GGTCGAGCGG TCGCGGCCCG GCTTCGAACA ATGGCCTGTG CGCCTACACG CCGTCGCGCG GGGTGATTTC GGTACGCGGT AACTGGCCGC TGACGCCGAC CATGGACGTG GTGGTGCCCT ACGCCCGTAC CATGGCCGAC CTGCTGGAAG TCCTCGACGT GGTGGTCGCC GAAGACACCG ACACCCGTGG CGACCTGTGG CGCCTGCAAC CGTGGGTGCC GATCCCGAGC GTCGCCTCGG TGCGCCCGGC TTCTTACCTT GAACTCGCCG TGAAAAGCGA TGCACTGGCC GGCAAACGCC TCGGCGTGCC GCGCATGTAC ATCAACGCCG ACCCTGAAGC CGGCACCAGC GAAGAACCGG GCATCGGCGG CCCGACCGGG CAACGCATCA ACACTCGTGC CTCGGTGATC GATCTGTGGA AACAGGCCCG TCAGGCCCTC GAAGCCGCCG GCGCCGAAGT GATCGAAGTG GATTTCCCGC TGGTCTCCAA CTGCGAAGGT GATCGTCCGG GCGCGCCGAC CGTGTTCAAT CGCGGCATCG TCTCGAAAGA GTTCATGCAC CACGAACTGT GGGACCTGTC GGCCTGGGCG TTCGATGATT TCCTGCGTGC CAACGGCGAC CCGAAACTCA ACCGTCTGGC AGACGTCGAC GGCCCGAAAA TCTTCCCCCA CGACCCGGGC ACCCTGCCCA ATCGTGAAGG CGACCTCGCT GCCGGCATGG ACGAATACGT GCGCATGGCC CAGCGCGGCA TCACGCCGTG GGATCAGATC CCGACCCTGC CGGACGGCCT GCGCGGTCTG GAGAAGACTC GCAAGCTCGA CCTCGAAGAC TGGATGGATC GTCTCGGCCT CGACGCCGTG CTGTTCCCGA CCAACGCCGA CGTGGGCCCC GCCGACGCCG ACGTCAACCC GGCCTCGGCG GACATCGCCT GGAGCAACGG CATCTGGGTC GCCAACGGCA ACCTTGCGAT CCGCCACCTC GGCGTGCCGA CCGTCACCGT GCCGATGGGC GTGATGGCCG ACATCGGCAT GCCGGTGGGA TTGACGTTTG CCGGTCGCGC CTATGACGAC TCGACGTTGC TGCGTCTGGC AGCGGCGTTT GAGGCGACCG GTTCCAGGCG TCTGGTGCCG CCACGCACGC CAGCGCTGGC GGCAGGCAAG TAA
|
Protein sequence | MIEVTEVSIA QLRAALESGQ TTAVELVQAY LARIDAYDGP DTATALNAVI VRNPDALKEA QASDARRAKG ETLGPLDGIP YTAKDSYLVK GLTAASGSPA FVDLVAQRDA FTIERLRAGG AICLGKTNMP PMANGGMQRG VYGRAESPYN ADYLTAPFAS GSSNGAGTAT AASFSAFGLA EETWSSGRGP ASNNGLCAYT PSRGVISVRG NWPLTPTMDV VVPYARTMAD LLEVLDVVVA EDTDTRGDLW RLQPWVPIPS VASVRPASYL ELAVKSDALA GKRLGVPRMY INADPEAGTS EEPGIGGPTG QRINTRASVI DLWKQARQAL EAAGAEVIEV DFPLVSNCEG DRPGAPTVFN RGIVSKEFMH HELWDLSAWA FDDFLRANGD PKLNRLADVD GPKIFPHDPG TLPNREGDLA AGMDEYVRMA QRGITPWDQI PTLPDGLRGL EKTRKLDLED WMDRLGLDAV LFPTNADVGP ADADVNPASA DIAWSNGIWV ANGNLAIRHL GVPTVTVPMG VMADIGMPVG LTFAGRAYDD STLLRLAAAF EATGSRRLVP PRTPALAAGK
|
| |