Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_3237 |
Symbol | |
ID | 3713072 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 3719142 |
End bp | 3719705 |
Gene Length | 564 bp |
Protein Length | 187 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | |
Product | NUDIX hydrolase |
Protein accession | YP_348966 |
Protein GI | 77459459 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.653435 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTTCAGCC CGAGCTTTTG CCCGAAATGC GGTGGCGCCG ACCTCGGTCA GCAGGTGCCG CCGGGCGATA CGCACGAGCG CCTGATGTGC CGCGGTTGCG GCTACATCCA CTATGTAAAC CCGAAGATCA TCGCCGGCTG CATCATCGAG CAGGACGGCA AGTACCTCTT GTGCCAACGG GCGATTCCCC CGCGCCCCGG CACCTGGACC CTGCCCGCCG GTTTCATGGA AAGCGGCGAA ACCACCGAAC AGGCCGCCCT GCGCGAAGTC TGGGAAGAAA GCGGCGTACG CGCGGAGATC GTCTCGCCTT ATTCAATCTT CAGCGTGCCG AAGATCAGCG AGGTCTACAT CATCTTCCGC GCACTCGCGC TGGAAATCAC TGGCGAGTAC GGTCCGGAAA CCCTCGCCTG CAAATTCTTC GCCCCCGAAG ACATCCCCTG GGAGCAGATC TACTACCCGG CGATCCGGCA GATCCTCGAA CGCTACATCG AGGAACGCCA GGCCGGGGTG TATGGCATGT ACATGGGCAA CGACGACAGC GGCAAGATTC ATTTCATGCG TTGA
|
Protein sequence | MFSPSFCPKC GGADLGQQVP PGDTHERLMC RGCGYIHYVN PKIIAGCIIE QDGKYLLCQR AIPPRPGTWT LPAGFMESGE TTEQAALREV WEESGVRAEI VSPYSIFSVP KISEVYIIFR ALALEITGEY GPETLACKFF APEDIPWEQI YYPAIRQILE RYIEERQAGV YGMYMGNDDS GKIHFMR
|
| |