Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_3236 |
Symbol | |
ID | 3713071 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 3718388 |
End bp | 3719140 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | |
Product | GntR family transcriptional regulator |
Protein accession | YP_348965 |
Protein GI | 77459458 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.686096 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACGCC TGCCACTCGA CGACAGCTTC AAGGTCAATC GCAACCCCGT CACCCTGCGC GAAATCGTGC TGGATAAACT GCGAAGCGCC ATCATGAACT TCCAGCTGCT GCCGGGCGAT CGCCTGGTGG AGCGCGATCT GTGCGATCGC CTGGGCGTGA GCCGTACGTC GGTGCGTGAA GCCTTGCGTC ACCTGGAATC CGAAGGTCTG GTGGAATTCG CCGACGCCAA GGGCCCGCGC GTGGCGATCA TTACCCTCGC CGATGCCGTC GACATTTATG AGCTGCGTTG CGTGCTCGAA GGCCTGATCG TCCAGCTGTT CACCCTGCGT GCCAAGGCCA AGGACATCAA GGCCCTGGAA AAAGCCCTCG ACGAGAACCG CAAGGCGCTC AAGGACGGCG AGCTGCAACA GGTGATCGAC TCGGTGCAGG GTTTCTACGA CGTGCTGCTG GAAGGCTCGG GCAACCATGT CGCGGCCACT CAACTGCGTC AGTTGCAGGC GCGCATCAGC TACCTGCGGG CGACGTCGGT GTCACAGGAA AACCGTCGCG GCGCGAGCAA CCAGGAAATG GAAAAAATGG TCGAGGCGAT CAAGAGCGGC GATCCGCTGG CGGCGCATCA GGCGTGCGTC GATCACGTTC GCGCCGCCGC TGCCGTGGCC CTCGATTATC TGAAGCGCAA ACAGGAAGAG ACAGGCGCCA CTCCACCGAT CACCCTGCCC ATCGCGCTGA AAGAACCGCG CATAGGTCAC TGA
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Protein sequence | MKRLPLDDSF KVNRNPVTLR EIVLDKLRSA IMNFQLLPGD RLVERDLCDR LGVSRTSVRE ALRHLESEGL VEFADAKGPR VAIITLADAV DIYELRCVLE GLIVQLFTLR AKAKDIKALE KALDENRKAL KDGELQQVID SVQGFYDVLL EGSGNHVAAT QLRQLQARIS YLRATSVSQE NRRGASNQEM EKMVEAIKSG DPLAAHQACV DHVRAAAAVA LDYLKRKQEE TGATPPITLP IALKEPRIGH
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