Gene Pfl01_3236 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3236 
Symbol 
ID3713071 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3718388 
End bp3719140 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content62% 
IMG OID 
ProductGntR family transcriptional regulator 
Protein accessionYP_348965 
Protein GI77459458 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.686096 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGCC TGCCACTCGA CGACAGCTTC AAGGTCAATC GCAACCCCGT CACCCTGCGC 
GAAATCGTGC TGGATAAACT GCGAAGCGCC ATCATGAACT TCCAGCTGCT GCCGGGCGAT
CGCCTGGTGG AGCGCGATCT GTGCGATCGC CTGGGCGTGA GCCGTACGTC GGTGCGTGAA
GCCTTGCGTC ACCTGGAATC CGAAGGTCTG GTGGAATTCG CCGACGCCAA GGGCCCGCGC
GTGGCGATCA TTACCCTCGC CGATGCCGTC GACATTTATG AGCTGCGTTG CGTGCTCGAA
GGCCTGATCG TCCAGCTGTT CACCCTGCGT GCCAAGGCCA AGGACATCAA GGCCCTGGAA
AAAGCCCTCG ACGAGAACCG CAAGGCGCTC AAGGACGGCG AGCTGCAACA GGTGATCGAC
TCGGTGCAGG GTTTCTACGA CGTGCTGCTG GAAGGCTCGG GCAACCATGT CGCGGCCACT
CAACTGCGTC AGTTGCAGGC GCGCATCAGC TACCTGCGGG CGACGTCGGT GTCACAGGAA
AACCGTCGCG GCGCGAGCAA CCAGGAAATG GAAAAAATGG TCGAGGCGAT CAAGAGCGGC
GATCCGCTGG CGGCGCATCA GGCGTGCGTC GATCACGTTC GCGCCGCCGC TGCCGTGGCC
CTCGATTATC TGAAGCGCAA ACAGGAAGAG ACAGGCGCCA CTCCACCGAT CACCCTGCCC
ATCGCGCTGA AAGAACCGCG CATAGGTCAC TGA
 
Protein sequence
MKRLPLDDSF KVNRNPVTLR EIVLDKLRSA IMNFQLLPGD RLVERDLCDR LGVSRTSVRE 
ALRHLESEGL VEFADAKGPR VAIITLADAV DIYELRCVLE GLIVQLFTLR AKAKDIKALE
KALDENRKAL KDGELQQVID SVQGFYDVLL EGSGNHVAAT QLRQLQARIS YLRATSVSQE
NRRGASNQEM EKMVEAIKSG DPLAAHQACV DHVRAAAAVA LDYLKRKQEE TGATPPITLP
IALKEPRIGH