Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_3230 |
Symbol | |
ID | 3713046 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 3713142 |
End bp | 3714170 |
Gene Length | 1029 bp |
Protein Length | 342 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | |
Product | BNR repeat-containing glycosyl hydrolase |
Protein accession | YP_348959 |
Protein GI | 77459452 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.448997 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTCGTT GCCGCCCGCC GGCGTTACGC AACACCGCGT TGCTGGCCAC AGCACTCTCT CTGCTGGGCT TTGCCACATT GTCGGCGCCG GTTCTCGCCG CCGAAGCGCC CGCCGACGTG GTCTATGCCA CCGAATCGGC CAAGGCCTCG AAAAGCCTGA TGCTCGATGT CGTTCACGCC GGAACCCGGC TGGTGGCGGT CGGGGATCGC GGGCACATTC TCTATTCCGA CGATCAGGGC AAGACCTGGA CCCAGGCGAA AGTGCCGAGC CGCCAGTTGC TGACCGCCGT GTACTTCGTC GATGACAAGC ACGGCTGGGC CGTCGGCCAC GACGCGCAGA TCCTCGCCAG CGCAGACGGC GGCCTGACCT GGACCAAACA GTTCGAAGAC CTCAAGCGCG AATCGCCGTT GCTCGACGTC TGGTTCAAGG ACGTCAACAG TGGCCTCGCC GTGGGTGCCT ACGGCGCGCT GCTGGAAACC ACCGACGGCG GCAAAAACTG GGAAGACGTC AGCGATCGCC TCGACAACGA AGACCAGTTC CACCTCAACG CCATCGCTTC GGTAAAAGAC GCCGGCCTGT TCATCGTCGG TGAGTCGGGC AGCATGTTCC GCTCCGCCGA CTGGGGCCAG ACCTGGGAAA AACTCGAAGG CCCGTACGAA GGCTCGCTGT TCGGCGTGAT CGGCACGGCG CAACCGCAAA CCCTGCTGGC TTACGGTCTG CGCGGCAATC TTTACCGCTC CACCGATTTC GGCAGCACGT GGGAGCAGGT CGAGCTGAAA GCCGCGCGCG GTTCGCTGGA GTTCGGCCTG TCCGGCGCCA CGCTGCTCGA GGATGGCTCC ATCGTCATCG TCGGCAACGG CGGCTCGGTG GTCAGCAGCA GTGACAACGG CGAAACCTTC AGCGTGTTCA ACCGTCCGGA TCGCATCTCG CTGTCGTCGG TCACCGCCGC CGGCAACGGC AATCTGATCC TGAGCGGGCA GGGTGGCGTC CGGGTCACTT CGCCGAACGG CGCCGAGCTG GGCAAATGA
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Protein sequence | MSRCRPPALR NTALLATALS LLGFATLSAP VLAAEAPADV VYATESAKAS KSLMLDVVHA GTRLVAVGDR GHILYSDDQG KTWTQAKVPS RQLLTAVYFV DDKHGWAVGH DAQILASADG GLTWTKQFED LKRESPLLDV WFKDVNSGLA VGAYGALLET TDGGKNWEDV SDRLDNEDQF HLNAIASVKD AGLFIVGESG SMFRSADWGQ TWEKLEGPYE GSLFGVIGTA QPQTLLAYGL RGNLYRSTDF GSTWEQVELK AARGSLEFGL SGATLLEDGS IVIVGNGGSV VSSSDNGETF SVFNRPDRIS LSSVTAAGNG NLILSGQGGV RVTSPNGAEL GK
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