Gene Pfl01_3230 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3230 
Symbol 
ID3713046 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3713142 
End bp3714170 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content65% 
IMG OID 
ProductBNR repeat-containing glycosyl hydrolase 
Protein accessionYP_348959 
Protein GI77459452 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.448997 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCGTT GCCGCCCGCC GGCGTTACGC AACACCGCGT TGCTGGCCAC AGCACTCTCT 
CTGCTGGGCT TTGCCACATT GTCGGCGCCG GTTCTCGCCG CCGAAGCGCC CGCCGACGTG
GTCTATGCCA CCGAATCGGC CAAGGCCTCG AAAAGCCTGA TGCTCGATGT CGTTCACGCC
GGAACCCGGC TGGTGGCGGT CGGGGATCGC GGGCACATTC TCTATTCCGA CGATCAGGGC
AAGACCTGGA CCCAGGCGAA AGTGCCGAGC CGCCAGTTGC TGACCGCCGT GTACTTCGTC
GATGACAAGC ACGGCTGGGC CGTCGGCCAC GACGCGCAGA TCCTCGCCAG CGCAGACGGC
GGCCTGACCT GGACCAAACA GTTCGAAGAC CTCAAGCGCG AATCGCCGTT GCTCGACGTC
TGGTTCAAGG ACGTCAACAG TGGCCTCGCC GTGGGTGCCT ACGGCGCGCT GCTGGAAACC
ACCGACGGCG GCAAAAACTG GGAAGACGTC AGCGATCGCC TCGACAACGA AGACCAGTTC
CACCTCAACG CCATCGCTTC GGTAAAAGAC GCCGGCCTGT TCATCGTCGG TGAGTCGGGC
AGCATGTTCC GCTCCGCCGA CTGGGGCCAG ACCTGGGAAA AACTCGAAGG CCCGTACGAA
GGCTCGCTGT TCGGCGTGAT CGGCACGGCG CAACCGCAAA CCCTGCTGGC TTACGGTCTG
CGCGGCAATC TTTACCGCTC CACCGATTTC GGCAGCACGT GGGAGCAGGT CGAGCTGAAA
GCCGCGCGCG GTTCGCTGGA GTTCGGCCTG TCCGGCGCCA CGCTGCTCGA GGATGGCTCC
ATCGTCATCG TCGGCAACGG CGGCTCGGTG GTCAGCAGCA GTGACAACGG CGAAACCTTC
AGCGTGTTCA ACCGTCCGGA TCGCATCTCG CTGTCGTCGG TCACCGCCGC CGGCAACGGC
AATCTGATCC TGAGCGGGCA GGGTGGCGTC CGGGTCACTT CGCCGAACGG CGCCGAGCTG
GGCAAATGA
 
Protein sequence
MSRCRPPALR NTALLATALS LLGFATLSAP VLAAEAPADV VYATESAKAS KSLMLDVVHA 
GTRLVAVGDR GHILYSDDQG KTWTQAKVPS RQLLTAVYFV DDKHGWAVGH DAQILASADG
GLTWTKQFED LKRESPLLDV WFKDVNSGLA VGAYGALLET TDGGKNWEDV SDRLDNEDQF
HLNAIASVKD AGLFIVGESG SMFRSADWGQ TWEKLEGPYE GSLFGVIGTA QPQTLLAYGL
RGNLYRSTDF GSTWEQVELK AARGSLEFGL SGATLLEDGS IVIVGNGGSV VSSSDNGETF
SVFNRPDRIS LSSVTAAGNG NLILSGQGGV RVTSPNGAEL GK