Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_3226 |
Symbol | |
ID | 3713042 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 3706341 |
End bp | 3707663 |
Gene Length | 1323 bp |
Protein Length | 440 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | |
Product | major facilitator transporter |
Protein accession | YP_348955 |
Protein GI | 77459448 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.255532 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.960957 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCAGG AACTGCGGCT TGTCCGGCGC ATCACGCTGA AACTGATTCC CTTCCTGATC CTGCTGTACC TGATCGCCTA TGTGGATCGC TCCGCCGTCG GCTTCGCCAA GCTGCACATG GGCGCCGACA TCGGCATCGG CGATGCCGCC TACGGCCTTG GCGCCGGGCT GTTTTTCATC GGCTACTTTC TGTTTGAAAT CCCTAGCAAC CTGATGCTCG AACGCTTCGG CGCGCGGCGC TGGTTCGCGC GGATCATGAT CACCTGGGGC GCGATCACCA TCGGCATGGC GTTCGTCCAG GGCCCGCACA GTTTCTACGT GATGCGGTTT CTGCTCGGTG CGGCGGAGGC GGGGTTCTTT CCCGGCGTTC TGTACTACAT CACTCAGTGG TTCCCGGTGC GTCATCGCGG CAAGATCCTC GGGCTGTTCA TCCTGTCCCA ACCCATCGCG ATGATGATCA CCGGCCCTGT CTCGGGAGGC CTGCTGGGCA TGGACGGCAT CCTCGGCCTG CACGGCTGGC AATGGCTGTT CATCGTCATC GGCACCCCGG CGATCTTGCT GACCTGGCCG GTATTGCGCT GGCTGCCGGA CGGCCCGCAG CAAGTGAAAT GGATGGACCA GGCCGAGAAG GACTGGTTGA CCGGCGAGCT GAAAAAGGAC CTGCAGGAAT ACGGCCAGAC CCGTCACGGC AATCCGCTGC ATGCGTTGAA AGACAAACGT GTGTTGCTGC TGGCGCTGTT CTATCTGCCG GTGACCCTGA GCATTTATGG CCTGGGCCTG TGGCTGCCGA CCCTGATCAA ACAGTTCGGC GGCAGCGATC TGGTGACCGG TTTCGTGTCA TCGGTGCCGT ACATCTTCGG GATCATCGGC CTGCTGATCA TTCCGCGCAG TTCCGACCGT TTGAACGACC GCTACGGCCA TCTGGCGGTG CTCTATGTGC TGGGTGCCAT GGGCCTGTTC CTCAGTGCCT GGCTGTCGTT GCCGGTGGCG CAACTGGCAG CGTTGTGTCT GGTGGCGTTC GCGCTGTTTT CCTGCACAGC GGTGTTCTGG ACTTTGCCGG GACGGTTCTT TGCCGGTGCC AGTGCGGCGG CCGGGATTGC CTTGATCAAC TCGGTGGGCA ACCTCGGCGG CTACATCGGC CCGTTCGTGA TCGGCGCCTT GAAGGAATAC ACCGGCAACC TTGCTTCGGG CCTGTACTTC CTGTCCGGGG TGATGGTGTG CGGGCTGATT CTGACGGGCG TCGTCTATCG CTTGCTCGAG CGCAAGCATG TGCTGCCAGT CGAGCAATTT GCAGCGAGCG CGCGCGGCGC GACGCGCACC TGA
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Protein sequence | MSQELRLVRR ITLKLIPFLI LLYLIAYVDR SAVGFAKLHM GADIGIGDAA YGLGAGLFFI GYFLFEIPSN LMLERFGARR WFARIMITWG AITIGMAFVQ GPHSFYVMRF LLGAAEAGFF PGVLYYITQW FPVRHRGKIL GLFILSQPIA MMITGPVSGG LLGMDGILGL HGWQWLFIVI GTPAILLTWP VLRWLPDGPQ QVKWMDQAEK DWLTGELKKD LQEYGQTRHG NPLHALKDKR VLLLALFYLP VTLSIYGLGL WLPTLIKQFG GSDLVTGFVS SVPYIFGIIG LLIIPRSSDR LNDRYGHLAV LYVLGAMGLF LSAWLSLPVA QLAALCLVAF ALFSCTAVFW TLPGRFFAGA SAAAGIALIN SVGNLGGYIG PFVIGALKEY TGNLASGLYF LSGVMVCGLI LTGVVYRLLE RKHVLPVEQF AASARGATRT
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