Gene Pfl01_3226 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3226 
Symbol 
ID3713042 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3706341 
End bp3707663 
Gene Length1323 bp 
Protein Length440 aa 
Translation table11 
GC content62% 
IMG OID 
Productmajor facilitator transporter 
Protein accessionYP_348955 
Protein GI77459448 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.255532 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.960957 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCAGG AACTGCGGCT TGTCCGGCGC ATCACGCTGA AACTGATTCC CTTCCTGATC 
CTGCTGTACC TGATCGCCTA TGTGGATCGC TCCGCCGTCG GCTTCGCCAA GCTGCACATG
GGCGCCGACA TCGGCATCGG CGATGCCGCC TACGGCCTTG GCGCCGGGCT GTTTTTCATC
GGCTACTTTC TGTTTGAAAT CCCTAGCAAC CTGATGCTCG AACGCTTCGG CGCGCGGCGC
TGGTTCGCGC GGATCATGAT CACCTGGGGC GCGATCACCA TCGGCATGGC GTTCGTCCAG
GGCCCGCACA GTTTCTACGT GATGCGGTTT CTGCTCGGTG CGGCGGAGGC GGGGTTCTTT
CCCGGCGTTC TGTACTACAT CACTCAGTGG TTCCCGGTGC GTCATCGCGG CAAGATCCTC
GGGCTGTTCA TCCTGTCCCA ACCCATCGCG ATGATGATCA CCGGCCCTGT CTCGGGAGGC
CTGCTGGGCA TGGACGGCAT CCTCGGCCTG CACGGCTGGC AATGGCTGTT CATCGTCATC
GGCACCCCGG CGATCTTGCT GACCTGGCCG GTATTGCGCT GGCTGCCGGA CGGCCCGCAG
CAAGTGAAAT GGATGGACCA GGCCGAGAAG GACTGGTTGA CCGGCGAGCT GAAAAAGGAC
CTGCAGGAAT ACGGCCAGAC CCGTCACGGC AATCCGCTGC ATGCGTTGAA AGACAAACGT
GTGTTGCTGC TGGCGCTGTT CTATCTGCCG GTGACCCTGA GCATTTATGG CCTGGGCCTG
TGGCTGCCGA CCCTGATCAA ACAGTTCGGC GGCAGCGATC TGGTGACCGG TTTCGTGTCA
TCGGTGCCGT ACATCTTCGG GATCATCGGC CTGCTGATCA TTCCGCGCAG TTCCGACCGT
TTGAACGACC GCTACGGCCA TCTGGCGGTG CTCTATGTGC TGGGTGCCAT GGGCCTGTTC
CTCAGTGCCT GGCTGTCGTT GCCGGTGGCG CAACTGGCAG CGTTGTGTCT GGTGGCGTTC
GCGCTGTTTT CCTGCACAGC GGTGTTCTGG ACTTTGCCGG GACGGTTCTT TGCCGGTGCC
AGTGCGGCGG CCGGGATTGC CTTGATCAAC TCGGTGGGCA ACCTCGGCGG CTACATCGGC
CCGTTCGTGA TCGGCGCCTT GAAGGAATAC ACCGGCAACC TTGCTTCGGG CCTGTACTTC
CTGTCCGGGG TGATGGTGTG CGGGCTGATT CTGACGGGCG TCGTCTATCG CTTGCTCGAG
CGCAAGCATG TGCTGCCAGT CGAGCAATTT GCAGCGAGCG CGCGCGGCGC GACGCGCACC
TGA
 
Protein sequence
MSQELRLVRR ITLKLIPFLI LLYLIAYVDR SAVGFAKLHM GADIGIGDAA YGLGAGLFFI 
GYFLFEIPSN LMLERFGARR WFARIMITWG AITIGMAFVQ GPHSFYVMRF LLGAAEAGFF
PGVLYYITQW FPVRHRGKIL GLFILSQPIA MMITGPVSGG LLGMDGILGL HGWQWLFIVI
GTPAILLTWP VLRWLPDGPQ QVKWMDQAEK DWLTGELKKD LQEYGQTRHG NPLHALKDKR
VLLLALFYLP VTLSIYGLGL WLPTLIKQFG GSDLVTGFVS SVPYIFGIIG LLIIPRSSDR
LNDRYGHLAV LYVLGAMGLF LSAWLSLPVA QLAALCLVAF ALFSCTAVFW TLPGRFFAGA
SAAAGIALIN SVGNLGGYIG PFVIGALKEY TGNLASGLYF LSGVMVCGLI LTGVVYRLLE
RKHVLPVEQF AASARGATRT