Gene Pfl01_3222 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3222 
Symbol 
ID3713038 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3702143 
End bp3703318 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content62% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_348951 
Protein GI77459444 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.545614 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.906294 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACATGC GTAAATTCTG GCCATTGCTG ATGGCCGGCA GCGTCGGCGC GATGGGACTT 
TCAAGTGCCT CGGCCGAGAG CTTCCAGTTT TTGGTGGGCT CCTACACCGC CGGCACCAGC
GAAGGCATCT ACCGGATGAA CTTCGACAGC GCCACCGGAC AGATCGACGC CAAACCGCTG
CAAGTGATCA AGAGCGAAAA CCCGTCGTGG CTGACCCTGT CGAAGGATCA GCGCCGGTTG
TTCGTGGTCA ACGAAAACGG CCCAGGCCAG AAAGATCCGG TCGGTCGTGT GAGCAGCTAC
GCCATCGATC CGAAGACTCA CGCGCTGACC CTGATCAATC AGGTCCAGAG CCTGGGCAAC
GAGCCGACCC ATTCCAGCCT CAGCGGCGAC GCCAGCCATC TGTTCGTCAG CAACTACTCG
GTGGTTGAAG ACCCGGGCGG CACCCTCGCG GTATTGCCGG TGGGCAGCGA CGGCAAGCTC
AAACCGGTGG TGCAGATGAG CGCGCACCCG GCGAGCCGGG TCAATCCCGA GCGTCAGGCC
TCGAACCACG TGCACTCGAC GGTGTCCTCG CCGGACGGCC GTTACGTGTT CTCCAATGAC
CTGGGTGCGG ACAAGGTCTT CATCTACCAA TTCGACCCGA AAGCCAAACC GGATCTGCCG
CTGACCCCGG CGAAGACCGC GTCGGTGCAA CTGCCAGCCG GCAGCGGCCC GCGTCATCTG
TTGTTCAGCG CGGACGGCAA ACATGCCTGG CTGACCATGG AAATGAGTGC TCAGGTCGCG
GTGTTCGACT ACAAGGACGG CGTGCTGACC CAGACGCAAC TGGTCGATCT GGCGGCCGGC
CAGCCAACCG CGGACAAAGC CGCCGCCGCG CTGCACGCGT CCGCCGATGG CAAATTCCTC
TACGTCAGCA ACCGCGGTAC CGCCAATCAG CTGCTGGTGT TCGCCATCGA CCCGGCCAGT
GGCCAGCTCA AGGAATTGCA ACGACGTTCG GTGGAAGGCG ATCACCCGCG CGAGTTCAGC
CTCGATCCAA GCGGCAAATT CCTGCTGATC GCCAATCAGA AGAGCAACCA GATTGTCGTG
GTCGAGCGCG ACGGCAAGAC CGGTCTGCTG GGCAAAACCG TGCAAAAACT GCCGATGGAC
GCCCCGAGCG ATCTCAAGTT TCTCGTGCGT CAATAA
 
Protein sequence
MNMRKFWPLL MAGSVGAMGL SSASAESFQF LVGSYTAGTS EGIYRMNFDS ATGQIDAKPL 
QVIKSENPSW LTLSKDQRRL FVVNENGPGQ KDPVGRVSSY AIDPKTHALT LINQVQSLGN
EPTHSSLSGD ASHLFVSNYS VVEDPGGTLA VLPVGSDGKL KPVVQMSAHP ASRVNPERQA
SNHVHSTVSS PDGRYVFSND LGADKVFIYQ FDPKAKPDLP LTPAKTASVQ LPAGSGPRHL
LFSADGKHAW LTMEMSAQVA VFDYKDGVLT QTQLVDLAAG QPTADKAAAA LHASADGKFL
YVSNRGTANQ LLVFAIDPAS GQLKELQRRS VEGDHPREFS LDPSGKFLLI ANQKSNQIVV
VERDGKTGLL GKTVQKLPMD APSDLKFLVR Q