Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_3213 |
Symbol | |
ID | 3713029 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 3692425 |
End bp | 3694065 |
Gene Length | 1641 bp |
Protein Length | 546 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_348942 |
Protein GI | 77459435 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.338113 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCGTT TCACCGCTCT CTTGCTGCCC CTGCTGATCT GCACGGCCAC CGCCCAGGCG GCCGAGCTGA CGGCCAGCGT GGATCGCAGT CGCCTGAACT CCGGCGAGAC GGTCGAACTC ACCCTCGAAT CCAACGACGT CACGCAGTTC GGCAAACCGG ACCTGAGCCC GCTGGAGCCG CTGTTCGAAG TGCGCGGCAC GCGGCAGGTC AACCAGTTGA ACACCCTCAA CGAAGACAAC CGCGCCACTA CTCGCTGGAT CATCACGTTG CTGCCCAAGC AGAACGGCAG CGTTGAAATC CCGCCGCTGA AACTGGGCGA CGTCGAGAGC CAGCCGATCA CCGTACAAGT GATCGAGAGC GACACCCGCG AAGAGAACAA CGCCCGCGAA CCGGTGTTCA TCGAGGCCAG CCTCGACCAG ACCAGCGTTT ACGTGCAGGC CCAGGCCATC CTGACTTTGC GCATCTACCA TTCGGTGTCG CTGTACGACG ACAGCAGCCT GACGCCGTTG CAGATCGCCG ATGCGCGCAT CGAGCAACTG GGCGACATGC GCACTTACGA AAAAGACATC AACGGTGTGC GCCATGGCGT GATCGAGATG CGCTACGCGA TCTATCCGCA GCACAGCGGC TTGCTGAGCA TCGCCCCGCA GACGTTCAGC GCCACACTGG TCGATACCCA GCCCTCGCAG GACGCCACGG CGCAGGGGCC GAAGCCGGGC AAACTGATGC ACATCAGCTC CGCCGCGACT TCGCTGACGG TCAAACCCAA ACCGATGACC TACCCCAGCG ATGCGCCGTG GCTGCCGGCC CGCAGCCTGA GCCTGAGCGA AAGCTGGAAC CCGGAGCCGG AACACACTCA GGTCGGCGAC TCCCTGACCC GCAGCCTGAC CCTCAAGGTC GAAGGCCTGG CCAGTTCGCA ACTGCCGGCC CTGCCCGCCA CCGAAGCCAA CGGCCTGCGC CGCTACCCGG ACCAACCGGT GCTGAACAAC CAGAGCAGCG ATCGCGGGCT GATCGGCAGT CGTGAAGAAC GTGAAGCGCT GGTGCCGAGC CGCAGTGGCT CGATCGAATT GCCAACAGTA GACGTGGTCT GGTGGAACAC CTTCGAAGAT CACCTGGAAC ACACCAGCCT GCCGGCGCGC ACCCTGCAAG TGGCGAACAA CCCGAGCCTG CAAGTCGACA CCCCGGCGGG CAACGCGCAA CCGCTCAGCG CCGCCGACAG CGAAGCCTTG TGGTGGTGGA AACTCAGCAC GCTCGTTCTC GCCTGCACCA CCCTGCTCGG CTTCGGCCTG TGGTGGCGTG CCCGCTGGCA ACCGGCGATC CTGCGCGCCG CGCAAACCGG CCCGAGCCCG CGCACCCTGC TCGACGACAT CAAACGCGCC AGCCAGGCCA ACGACCCCCA CGCCACCCGC CAGGCCCTCG ACGCCTGGGC CCGTCAGCAG CCGGAAACAC TGGCGGACAT GGCGGCGCGG TTTGTGCCTC TGTCGGATGC GCTCGATGGG CTGAACGGCG CGCTGTACAG CGAGACCGGG CAGCATTGGC AGGGTGAGGA TCTGTGGCGG GCGATCCGGA CGATTCCGAC CGCGGAGCGG GTGCAGGATC CGGTCGGGGA TAGTGGGTTG CCGCCGCTTT ATCCGAAGTA G
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Protein sequence | MTRFTALLLP LLICTATAQA AELTASVDRS RLNSGETVEL TLESNDVTQF GKPDLSPLEP LFEVRGTRQV NQLNTLNEDN RATTRWIITL LPKQNGSVEI PPLKLGDVES QPITVQVIES DTREENNARE PVFIEASLDQ TSVYVQAQAI LTLRIYHSVS LYDDSSLTPL QIADARIEQL GDMRTYEKDI NGVRHGVIEM RYAIYPQHSG LLSIAPQTFS ATLVDTQPSQ DATAQGPKPG KLMHISSAAT SLTVKPKPMT YPSDAPWLPA RSLSLSESWN PEPEHTQVGD SLTRSLTLKV EGLASSQLPA LPATEANGLR RYPDQPVLNN QSSDRGLIGS REEREALVPS RSGSIELPTV DVVWWNTFED HLEHTSLPAR TLQVANNPSL QVDTPAGNAQ PLSAADSEAL WWWKLSTLVL ACTTLLGFGL WWRARWQPAI LRAAQTGPSP RTLLDDIKRA SQANDPHATR QALDAWARQQ PETLADMAAR FVPLSDALDG LNGALYSETG QHWQGEDLWR AIRTIPTAER VQDPVGDSGL PPLYPK
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