Gene Pfl01_3213 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3213 
Symbol 
ID3713029 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3692425 
End bp3694065 
Gene Length1641 bp 
Protein Length546 aa 
Translation table11 
GC content66% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_348942 
Protein GI77459435 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.338113 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCGTT TCACCGCTCT CTTGCTGCCC CTGCTGATCT GCACGGCCAC CGCCCAGGCG 
GCCGAGCTGA CGGCCAGCGT GGATCGCAGT CGCCTGAACT CCGGCGAGAC GGTCGAACTC
ACCCTCGAAT CCAACGACGT CACGCAGTTC GGCAAACCGG ACCTGAGCCC GCTGGAGCCG
CTGTTCGAAG TGCGCGGCAC GCGGCAGGTC AACCAGTTGA ACACCCTCAA CGAAGACAAC
CGCGCCACTA CTCGCTGGAT CATCACGTTG CTGCCCAAGC AGAACGGCAG CGTTGAAATC
CCGCCGCTGA AACTGGGCGA CGTCGAGAGC CAGCCGATCA CCGTACAAGT GATCGAGAGC
GACACCCGCG AAGAGAACAA CGCCCGCGAA CCGGTGTTCA TCGAGGCCAG CCTCGACCAG
ACCAGCGTTT ACGTGCAGGC CCAGGCCATC CTGACTTTGC GCATCTACCA TTCGGTGTCG
CTGTACGACG ACAGCAGCCT GACGCCGTTG CAGATCGCCG ATGCGCGCAT CGAGCAACTG
GGCGACATGC GCACTTACGA AAAAGACATC AACGGTGTGC GCCATGGCGT GATCGAGATG
CGCTACGCGA TCTATCCGCA GCACAGCGGC TTGCTGAGCA TCGCCCCGCA GACGTTCAGC
GCCACACTGG TCGATACCCA GCCCTCGCAG GACGCCACGG CGCAGGGGCC GAAGCCGGGC
AAACTGATGC ACATCAGCTC CGCCGCGACT TCGCTGACGG TCAAACCCAA ACCGATGACC
TACCCCAGCG ATGCGCCGTG GCTGCCGGCC CGCAGCCTGA GCCTGAGCGA AAGCTGGAAC
CCGGAGCCGG AACACACTCA GGTCGGCGAC TCCCTGACCC GCAGCCTGAC CCTCAAGGTC
GAAGGCCTGG CCAGTTCGCA ACTGCCGGCC CTGCCCGCCA CCGAAGCCAA CGGCCTGCGC
CGCTACCCGG ACCAACCGGT GCTGAACAAC CAGAGCAGCG ATCGCGGGCT GATCGGCAGT
CGTGAAGAAC GTGAAGCGCT GGTGCCGAGC CGCAGTGGCT CGATCGAATT GCCAACAGTA
GACGTGGTCT GGTGGAACAC CTTCGAAGAT CACCTGGAAC ACACCAGCCT GCCGGCGCGC
ACCCTGCAAG TGGCGAACAA CCCGAGCCTG CAAGTCGACA CCCCGGCGGG CAACGCGCAA
CCGCTCAGCG CCGCCGACAG CGAAGCCTTG TGGTGGTGGA AACTCAGCAC GCTCGTTCTC
GCCTGCACCA CCCTGCTCGG CTTCGGCCTG TGGTGGCGTG CCCGCTGGCA ACCGGCGATC
CTGCGCGCCG CGCAAACCGG CCCGAGCCCG CGCACCCTGC TCGACGACAT CAAACGCGCC
AGCCAGGCCA ACGACCCCCA CGCCACCCGC CAGGCCCTCG ACGCCTGGGC CCGTCAGCAG
CCGGAAACAC TGGCGGACAT GGCGGCGCGG TTTGTGCCTC TGTCGGATGC GCTCGATGGG
CTGAACGGCG CGCTGTACAG CGAGACCGGG CAGCATTGGC AGGGTGAGGA TCTGTGGCGG
GCGATCCGGA CGATTCCGAC CGCGGAGCGG GTGCAGGATC CGGTCGGGGA TAGTGGGTTG
CCGCCGCTTT ATCCGAAGTA G
 
Protein sequence
MTRFTALLLP LLICTATAQA AELTASVDRS RLNSGETVEL TLESNDVTQF GKPDLSPLEP 
LFEVRGTRQV NQLNTLNEDN RATTRWIITL LPKQNGSVEI PPLKLGDVES QPITVQVIES
DTREENNARE PVFIEASLDQ TSVYVQAQAI LTLRIYHSVS LYDDSSLTPL QIADARIEQL
GDMRTYEKDI NGVRHGVIEM RYAIYPQHSG LLSIAPQTFS ATLVDTQPSQ DATAQGPKPG
KLMHISSAAT SLTVKPKPMT YPSDAPWLPA RSLSLSESWN PEPEHTQVGD SLTRSLTLKV
EGLASSQLPA LPATEANGLR RYPDQPVLNN QSSDRGLIGS REEREALVPS RSGSIELPTV
DVVWWNTFED HLEHTSLPAR TLQVANNPSL QVDTPAGNAQ PLSAADSEAL WWWKLSTLVL
ACTTLLGFGL WWRARWQPAI LRAAQTGPSP RTLLDDIKRA SQANDPHATR QALDAWARQQ
PETLADMAAR FVPLSDALDG LNGALYSETG QHWQGEDLWR AIRTIPTAER VQDPVGDSGL
PPLYPK