Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_3198 |
Symbol | |
ID | 3713014 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 3675082 |
End bp | 3675633 |
Gene Length | 552 bp |
Protein Length | 183 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | |
Product | sigma-24 (FecI) |
Protein accession | YP_348927 |
Protein GI | 77459420 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.0767993 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.00326086 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAAGACG CCGGACAAAG TTCGATGGTC CAGCTGTTCC TGACGTCCTA CGAGGACTTT CGGGTGCGCC TGCGACGCCG TCTCGGCTCG GAGGACCTGG CCAACGACGT GCTGCACGAA ACCTACCTGC GGGTCGACCG CATGGAAGCG CCGCCGAACC TGCTGCGGCC CAACGCCTAC CTCTATCGCA TGGCCCTGAA CATCGCCGCC GACCGCCGCC AGGCCGATGC GCGGCTGCTC ACCGGCAGCG AAGTCGAAGA ACTGCTGCAA GTCAGCGACG AAGCGCTGGA CCCGATGCGC GTCGTGGGCG GCCAGAAGGA AATCCAGTCC CTGCTGAGCG CCCTCTACGA ACTGCCGGCC CGGCGCCGCC GGATCTTCAT CGCCGCACGC CTGGAAGAAG CGCCGCACCT GGAAATCTCC CAGCGTTTCG GCATCTCCAC GCGCATGGTC GAGAAGGAAA TCAAGGCTGC CCTCGGACAC TGCGCGGCCA AACTGGAAAG AAAAGTGTTT CAGCGGTTCG GTCGCGGGGC CGGAAAACCG TCTAGTGAAT GA
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Protein sequence | MKDAGQSSMV QLFLTSYEDF RVRLRRRLGS EDLANDVLHE TYLRVDRMEA PPNLLRPNAY LYRMALNIAA DRRQADARLL TGSEVEELLQ VSDEALDPMR VVGGQKEIQS LLSALYELPA RRRRIFIAAR LEEAPHLEIS QRFGISTRMV EKEIKAALGH CAAKLERKVF QRFGRGAGKP SSE
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