Gene Pfl01_3193 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3193 
Symbol 
ID3712992 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3671027 
End bp3672019 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content41% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_348922 
Protein GI77459415 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0244949 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00323377 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATCAGAA TGACTGCAGA AAAGAGAGTT AGAACAATAG GCTCCGTAGC TGATGAGCTA 
ATAAAAAAGT CCAGAGAGGC GGCCTTGGCC TCAGTGCAGA TATTTAATAA TCCAGCTCTG
TTGTTTAAGT CCGAGATATT CATTGTGTTG ATGATGATAT CTTGGACTTA TCTTCTTCAC
GCGTTCTATC GAAAGAAGGG TGTCGAGTAT AGATACTTTA AGCTTGAAGG CAAGCGCAAG
AGATTTCAAA AAACCGCTAA AGGCGCTATG AAACATTGGG AACTAGAGAA GTGCCTAAAT
CAAAAAGAGT CGCCAATAGA TGCGAGCGCT GCGAACAATC TTCGATTTTT AATTGGCCTT
AGGCATGAGA TCGAACACCA AATGACAACG AGGATAGATC AGTTTTTAAG TGCAAGGTTC
CAAGCTTGCT GCCTAAATTA CAATGAAGCT ATAAAGTCGC TATTTGGGCC TCAGTACGGC
ATAGATAAGC ATTTGTCTTT TAGTCTTCAA TTCTCATCCT TAAATAAGGA GCAGGTGGAC
CAATTGTCGC AGGCTAATGG TCTCCCGGAA AATATACGGG CATATATAAC TGCGTTTGAC
TTGGCTCTGA GCGATGAGGA GTTTAATGAT CCACGGTTCT CTTATCGTGT TTTCTTTGTA
CCTAAAACTG CAAACCATAA AGGTCAAGCT GATCAGGTTA TTGAGTTCAT TAAGCCAGGA
TCTGAAATTG CTGAAGGAAT GAATACGAAG TATATTCAAA TTAAGGAAAC TGAACGTCCT
AAGTATTTGC CATCTAAAAT TGTCGAAAAA GTTCAAGGCG CCGGCTATCC ACGATTTACC
ATGACGCATC ACACCAGGAT GTGGCAATTC TGCGAAGCAA AAAAACAAGG TAAAGGTTTT
GGAGTAATGG TTATGAATAC TTGGTATTGG TATGAAACGT GGCTGGATTA CGTACTGGCC
GAATGTGAAG AGCGGAAAAG TGAATTTGTA TAA
 
Protein sequence
MIRMTAEKRV RTIGSVADEL IKKSREAALA SVQIFNNPAL LFKSEIFIVL MMISWTYLLH 
AFYRKKGVEY RYFKLEGKRK RFQKTAKGAM KHWELEKCLN QKESPIDASA ANNLRFLIGL
RHEIEHQMTT RIDQFLSARF QACCLNYNEA IKSLFGPQYG IDKHLSFSLQ FSSLNKEQVD
QLSQANGLPE NIRAYITAFD LALSDEEFND PRFSYRVFFV PKTANHKGQA DQVIEFIKPG
SEIAEGMNTK YIQIKETERP KYLPSKIVEK VQGAGYPRFT MTHHTRMWQF CEAKKQGKGF
GVMVMNTWYW YETWLDYVLA ECEERKSEFV