Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_3176 |
Symbol | |
ID | 3712975 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 3657893 |
End bp | 3658438 |
Gene Length | 546 bp |
Protein Length | 181 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | |
Product | general secretion pathway M protein |
Protein accession | YP_348905 |
Protein GI | 77459398 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.317851 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.0212721 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATAGCC CATCGCTTGC GAAATACCGC GCCGGTTGGC AGCGCTTCAA CGCTGAGTTG CAGGCCCGTT GGCAGCCGTT GGCCGTGCGG GAGAAGCGCA TGGTCGGTGG GATGGCGGCG CTGTTGCTGG GGCTGTTTGT GTGGGTGGCG TTGGTTCAGC CGCCGCTGAA GAAGATCGCC GCCTCGCAAG TCGAAACCCC GAAATTGCGC GCCCAGGCAG AAGCGCTGGA AGTGCTGTTG CGCGACGTCA GCGTGCGCCC CGACGGGCAG AACCTGGAGC AGTCGCTGCA GCAAACGTTG CAGGCCAGCG GACTGGGCGG CCATTACCAA TTGGCGGCCG CGTCCGCCGG CTGGCAGTTG ACCTTCGATG CGGCACCGGC CGACGCCGTT CTCGACTGGC TGCTGAGCCA GCCGCGGAAT TTTTCACTGC AAGTGGTCGA GGCTCGTCTG CAACGCGCAG ACGACGCCGC GACCGATGAC ACCGCCGGCA CTCTGTCGGG CACCGTACGC ATGGATCAGG CGCTGGGCGC TAAGGAAGCT TCATGA
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Protein sequence | MNSPSLAKYR AGWQRFNAEL QARWQPLAVR EKRMVGGMAA LLLGLFVWVA LVQPPLKKIA ASQVETPKLR AQAEALEVLL RDVSVRPDGQ NLEQSLQQTL QASGLGGHYQ LAAASAGWQL TFDAAPADAV LDWLLSQPRN FSLQVVEARL QRADDAATDD TAGTLSGTVR MDQALGAKEA S
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