Gene Pfl01_3176 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3176 
Symbol 
ID3712975 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3657893 
End bp3658438 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content65% 
IMG OID 
Productgeneral secretion pathway M protein 
Protein accessionYP_348905 
Protein GI77459398 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.317851 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0212721 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAGCC CATCGCTTGC GAAATACCGC GCCGGTTGGC AGCGCTTCAA CGCTGAGTTG 
CAGGCCCGTT GGCAGCCGTT GGCCGTGCGG GAGAAGCGCA TGGTCGGTGG GATGGCGGCG
CTGTTGCTGG GGCTGTTTGT GTGGGTGGCG TTGGTTCAGC CGCCGCTGAA GAAGATCGCC
GCCTCGCAAG TCGAAACCCC GAAATTGCGC GCCCAGGCAG AAGCGCTGGA AGTGCTGTTG
CGCGACGTCA GCGTGCGCCC CGACGGGCAG AACCTGGAGC AGTCGCTGCA GCAAACGTTG
CAGGCCAGCG GACTGGGCGG CCATTACCAA TTGGCGGCCG CGTCCGCCGG CTGGCAGTTG
ACCTTCGATG CGGCACCGGC CGACGCCGTT CTCGACTGGC TGCTGAGCCA GCCGCGGAAT
TTTTCACTGC AAGTGGTCGA GGCTCGTCTG CAACGCGCAG ACGACGCCGC GACCGATGAC
ACCGCCGGCA CTCTGTCGGG CACCGTACGC ATGGATCAGG CGCTGGGCGC TAAGGAAGCT
TCATGA
 
Protein sequence
MNSPSLAKYR AGWQRFNAEL QARWQPLAVR EKRMVGGMAA LLLGLFVWVA LVQPPLKKIA 
ASQVETPKLR AQAEALEVLL RDVSVRPDGQ NLEQSLQQTL QASGLGGHYQ LAAASAGWQL
TFDAAPADAV LDWLLSQPRN FSLQVVEARL QRADDAATDD TAGTLSGTVR MDQALGAKEA
S