| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_3175 |
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| Symbol | |
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| ID | 3712935 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas fluorescens Pf0-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007492 |
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| Strand | - |
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| Start bp | 3655545 |
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| End bp | 3657896 |
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| Gene Length | 2352 bp |
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| Protein Length | 783 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | |
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| Product | type II and III secretion system protein |
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| Protein accession | YP_348904 |
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| Protein GI | 77459397 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.114854 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.0336738 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGGGT CAGGGTCCAA ACGCATGGCG TTGCCGATGC TGTTGATGGC ATTGAGCGCG
TGCAGCAACA CCACACCACC GAATCAACCG CCGCTGCTGG TGGACAGCGA ACTCGGCCGG
CCGCTGGCCA ACACCCAGCG CAGTGGCGAC GCGGTGCTCG ACCGCGAGCG TGCGCAGGCT
CAGGCAAGAC CTGCGCCGAA GCAATTGCAC AACATCACCG AACGCGCCCG CAGTGGCGGT
TCGGCGCGGG GCACGACGTT GCCGGCCAAT CCGTTGGGCG ATCAACCGGT GACGCTGAAT
TTTGTCGACG CCGATATCCA AGCGGTGGTG CGGGCGTTGT CGCGCTCGAC CGGTCAGCAG
TTTCTGGTCG ATCCACGGGT CAAGGGCAAC CTGACGCTGG TCTCCGAAGG TCAGGTGCCG
GCGCATCAGG CCTACGACAT GTTGCTGGCG GCGCTGCGCA TGCAGGGTTT CAGCGTGGTC
GATGTCGGCG GCGTGGCGCA GGTGGTGCCG GAGGCCGACG CCAAATTGCT CGGCGGGCCG
ATCTACAGCG CCGACAAACC GGCCGGCAAC GGCATGCTCA CCCGCACGTT CCGCCTGCAA
TACGAGAACG CCGTGAACCT GATCCCGGTG CTGCGCCCGA TCGTGTCGCC GAACAATCCG
ATCAACGCTT ATCCCGGCAA CAACACCATC GTCGTCACCG ACTATGCCGA GAACCTGACG
CGGGTCGCAC AACTGATTCA GGGCATCGAC ACGCCGAGCG CCATCGACAC TGACGTGGTG
CAGATCCAGA ACGGCATCGC CGCCGACATC GCGCCAATGG TCGCCGACCT GCTCGACGCA
CCGGGCAATG ACCCGACGCA GAAAATCGCA GTGATCGGCG ACCCGCGCTC CAACACCATC
ATCATCCGCG CCGGCAGCCC CGAGCGCACG GAACTGGCGC GCAACCTGAT CTACAAACTC
GACAACGCGC AGAGCAATCC GAGCAATCTG CACGTGGTGT ATCTGCGCAA CGCCCAGGCC
GGCAAACTGG CCCAGGCCCT GCGCGGGTTG TTGACCGGCG AGAGCGACAG CGGCACCAGC
GACAATGCGC GCTCGGTGCT CAGCAACATG GGCAGTTCCA CCAACTCGGG CGGTGGGCAA
AACGGCCAGA GCGGTGCGCA AAGCAACGGC AGCACCTCGA CCACCAACAA CGGCAGCACC
GGCGGCAGTT ACGCCCAGGG CAGCAGCGCC AGCAGCGGTG GCAGCAATGC GCAAAGCAGC
GAACAGAACG TGGCCTTCAG CGCTGGCGGC GTGACCATTC AGGCGGATGC CACCACCAAC
ACCTTGCTGA TTTCCGCGCC GGAACCGCTG TATCGCAACC TGCGCGAAGT GATTGACCTG
CTCGATCAGC GCCGCGCACA AGTGGTGATC GAAAGCCTGA TCGTCGAAGT TGGCGAGGAC
GATGCCAGCG AATTCGGCGT GCAATGGCAG ACCGGCAATC TCGGCGGTAA AGGCGTGATC
GGCGGCGCCA ACCTCGGTGG TTCGGGGATC AACGTCAACG GCAAGACCAG CCTCGATGTA
CTGCCGCAAG GTTTGAACCT CGGCTACGTC AACGGCACCG TCGACATCCC CGGCATCGGC
AAGATCCTCG ACCTTAAAGT GCTGGCCCGG GCGCTGAAGA GCAAGGGCGG CACCAACGTG
CTGTCGACGC CGAACCTGCT GACCCTGGAC AACGAAGCCG CGAGTATTTT CGTCGGCCAG
ACCATCCCGT TTGTCAGCGG CAGTTACGTC ACCGGCGGCG GGGGCACCAG CAACAACCCG
TTCCAGACCG TGACCCGTGA AGAGGTCGGT TTGAAGCTCA ACGTGCGGCC GCAGATTTCC
GAGGGCGGCA CGGTGAAGCT CGACATCTAT CAGGAAGTCA GCAGCATCGA CGAACGCGCC
TCGGCGGCGG CCAATTCGGC GGGGATCGTC ACCAGCAAAC GCGCGCTCGA CACCAGCATC
CTGTTGGATG ACGGGCAGAT CATGGTGCTC GGCGGTCTGC TGCAGGATGG CTACAGCCAG
AGCAATGACG CGGTGCCGTG GCTCTCGAAC ATTCCGGGGA TTGGCGCACT GTTTCGCAAC
GAACGCCGCT CGATCACCAA GACCAATCTG ATGGTGTTCC TGCGCCCGTA CATCATCCGC
GACAGCGCGG CGGGCCGGAG TATTACGCTG AACCGCTACG ACTTCATGCG CCGCGCTCAG
GGCGGTCTGC AACCGGAGCG CAGCTGGGCG ATGCCGGACA TGCAGGCGCC GCAATTGCCG
GCCACTGCCC AAGGCGTGCC GGCACCGGTG TCCGGCCCGC GTGCGACCAT CAAAGCGGTG
CCGCTGCAAT GA
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| Protein sequence | MKGSGSKRMA LPMLLMALSA CSNTTPPNQP PLLVDSELGR PLANTQRSGD AVLDRERAQA
QARPAPKQLH NITERARSGG SARGTTLPAN PLGDQPVTLN FVDADIQAVV RALSRSTGQQ
FLVDPRVKGN LTLVSEGQVP AHQAYDMLLA ALRMQGFSVV DVGGVAQVVP EADAKLLGGP
IYSADKPAGN GMLTRTFRLQ YENAVNLIPV LRPIVSPNNP INAYPGNNTI VVTDYAENLT
RVAQLIQGID TPSAIDTDVV QIQNGIAADI APMVADLLDA PGNDPTQKIA VIGDPRSNTI
IIRAGSPERT ELARNLIYKL DNAQSNPSNL HVVYLRNAQA GKLAQALRGL LTGESDSGTS
DNARSVLSNM GSSTNSGGGQ NGQSGAQSNG STSTTNNGST GGSYAQGSSA SSGGSNAQSS
EQNVAFSAGG VTIQADATTN TLLISAPEPL YRNLREVIDL LDQRRAQVVI ESLIVEVGED
DASEFGVQWQ TGNLGGKGVI GGANLGGSGI NVNGKTSLDV LPQGLNLGYV NGTVDIPGIG
KILDLKVLAR ALKSKGGTNV LSTPNLLTLD NEAASIFVGQ TIPFVSGSYV TGGGGTSNNP
FQTVTREEVG LKLNVRPQIS EGGTVKLDIY QEVSSIDERA SAAANSAGIV TSKRALDTSI
LLDDGQIMVL GGLLQDGYSQ SNDAVPWLSN IPGIGALFRN ERRSITKTNL MVFLRPYIIR
DSAAGRSITL NRYDFMRRAQ GGLQPERSWA MPDMQAPQLP ATAQGVPAPV SGPRATIKAV
PLQ
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