| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_3174 |
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| Symbol | |
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| ID | 3712934 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas fluorescens Pf0-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007492 |
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| Strand | - |
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| Start bp | 3654142 |
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| End bp | 3655548 |
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| Gene Length | 1407 bp |
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| Protein Length | 468 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | |
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| Product | type II secretion system protein E (GspE) |
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| Protein accession | YP_348903 |
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| Protein GI | 77459396 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.277379 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.0236631 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCAT TGCCTTACGC CTGGGCCAAG GCGCAGCGGA TTCTGCTGCG CGACGGCGTG
CTGACGGTGT GCCCGTCGAC GCCGGGCTGG TCGATCAGCG AGGTGCGCCG GCAGTTCGGC
GCGGCCAGGC TTGAGCGGGT GCGCGATGAC GAACTCGACG GCTTGCTCGC CACGGCTTAC
GCCGACACTG GCAGCGCGGC GGCGGTGGTC GGTGCGGCGG AAAACGAAGT CGACCTCGAT
CGCCTGATGC AGGACATGCC GGAAATCACT GACCTGCTCG ACACCCAGGA CGGCGCGCCG
GTGATCCGCA TGATCAACGC CTTGCTCACC CAAGCGGCGC GGGACGAGGC CAGCGACATT
CACATCGAAC CGTTCGAAAC CCATTCGGTG GTGCGCTACC GGGTCGATGG CACCCTGCGC
GACGTGGTCT CGCCGCGCAA GGCGTTGCAC GGTGCGCTGG TGTCGCGGAT CAAGATCATG
GCCCAGCTCG ATATCGCCGA AAAACGCCTG CCGCAGGACG GGCGCATTGC GTTGCGCGTA
GCAGGGCGGC CGATCGACAT TCGCGTATCG ACCGTGCCGA CCGGCCATGG CGAGCGCGTG
GTGATGCGTC TGCTGGACAA GCAGGCCGGG CGCCTGCATC TGGAAACCCT GGGCATGGAC
GCGCAGGTGC TGGCCAAACT CGATCACCTG ATCCGCCAGC CCCACGGCAT TGTGCTGGTC
ACCGGCCCGA CCGGCAGCGG CAAGACCACG AGTTTGTATG CGGCACTGGC GCGGCTCGAT
GCGAGCACCA GCAACATCCT CACCGTGGAA GACCCGGTGG AGTACGACCT GCCGGGCATC
AGCCAGATTC AGGTCAACGC CAAGATCGAC ATGACTTTTG CCCTCGCGCT GCGTGCCATT
TTGCGCCAGG ACCCGGACAT CATCATGATC GGCGAGATCC GCGACCTCGA AACCGCGCAG
ATCGCGGTGC AGGCGTCGCT GACCGGTCAC CTGGTGCTCG CGACCCTGCA CACCAACGAC
GCGGTCTCGG CGGTCAACCG CTTGATCGAC ATGGGCGTCG AGCCGTTTTT GCTGGCCTCG
TCAATGCTCG GGGTGTTGGC CCAGCGTTTG GTGCGGCGCC TGTGCAATCA GTGCAAACAG
GAAGATCCGG CCACGCCCGG CACCTGGCGC CCGGTCGGTT GCGCGGCGTG CAACCACACC
GGTTACAGCG GCCGGACCGG CATTCATGAA TTGTTCTGCA TCGATGACGA CATCCGCACG
CTGATTCACC AAGGGGCAGG GGAGCAGGCT TTGCGCGCGG CGGCGAGCAA GGCCGGGATG
TTCAGCCTGC GTGAGGACGG CGAGCGCTGG ATTCGCAGCG GTGCCACAGC CCCTGAAGAA
ATCCTTCGCG TGACACGGGA CGCCTGA
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| Protein sequence | MSALPYAWAK AQRILLRDGV LTVCPSTPGW SISEVRRQFG AARLERVRDD ELDGLLATAY
ADTGSAAAVV GAAENEVDLD RLMQDMPEIT DLLDTQDGAP VIRMINALLT QAARDEASDI
HIEPFETHSV VRYRVDGTLR DVVSPRKALH GALVSRIKIM AQLDIAEKRL PQDGRIALRV
AGRPIDIRVS TVPTGHGERV VMRLLDKQAG RLHLETLGMD AQVLAKLDHL IRQPHGIVLV
TGPTGSGKTT SLYAALARLD ASTSNILTVE DPVEYDLPGI SQIQVNAKID MTFALALRAI
LRQDPDIIMI GEIRDLETAQ IAVQASLTGH LVLATLHTND AVSAVNRLID MGVEPFLLAS
SMLGVLAQRL VRRLCNQCKQ EDPATPGTWR PVGCAACNHT GYSGRTGIHE LFCIDDDIRT
LIHQGAGEQA LRAAASKAGM FSLREDGERW IRSGATAPEE ILRVTRDA
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