Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_3167 |
Symbol | |
ID | 3712927 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 3635805 |
End bp | 3636836 |
Gene Length | 1032 bp |
Protein Length | 343 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | |
Product | AraC family transcriptional regulator |
Protein accession | YP_348896 |
Protein GI | 77459389 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGTAA AAGTCCAAGA CCCCACCTTC GAACTGGCGC TGGTGTCGCC ATTTCTCCTG CAAACCCTGG CCGAAGTCGC CGCCAACAAG GGCGTCGAGC CGCAGAGTCT GTGCCGTGGC CTGGGGTTTG ATTTCGACGA CCTGCAGGAT CCGGCGCAGC GGATTTCCTA TCGCCAGGCC GTGGCGATGA TCCAGCGTGC GCTCAAGGCT TTGCCCAATC AGGGGCTGGG CCTGTGGGTC GGCGCGCAGA ACGTGCTCGG TACGCTGGGT CTGCTCGGGC ATGTGCTGTC GCTGTGCAAG ACCTTGCGCG ACGCGTTCGA AATCGGGGTT CGGCATCAGC ACACTTCCGG CGGGATCGTG GTTTCCAGCG TCGATGTGGT AGGCGATCAG GTCTACGTCG ACGTTGAGTG CCGGCTGCCG TTTGCCGAGG TGCAGGTGTT TGCCGTTGAA GAGTTTTTCG CCAGCCTGCT GGTCTATGGC CGGGCGCTGG TGGGCGAGAC GTTCAAGCCG ATTGCCGTGG AGTTCATGCA CGCCGCGCCG GATTACCTGG ATGAGTACAG GCGGTTGCTG GGGCCGGAGG TGCGCTTCGG GTGCCTGCAC AACCGCATGT TGATCGACGT GCAATGGCTG GATGTGAACC TGCCCAACCA CCATTCGCTG GCGCTGCGTC AGGCGGTCAA GTTGCTGGAG CTGGAGGCGG CGCAGGTTCA TCAGAAACTC GATCTGATCC AGGCGGTGGA GCGGGCGATT GCCCGTGACT TGAGCCGGGG CAGCCATATT GAAAAGATTG CCGCCGACTT GAATATGAGC AGCCGCACTC TGCGCCGGCG GCTGACTGAG CATTCGCTGA CGTTCGAGGC GCTGCTGGAA CAAGTGCGTC AGGCGCGCAC CATGAGTTTG CTGGCTAATC CTGATATGCC GATTGAGCGG ATTACCGAGG AAGTCGGCTA CAGCGACGTG CGTAGTTTTC GCCGGGCGTT CAAACGCTGG ACGGGGAAAA GCCCGAGTGC GTGGCGCAGT GCTTCGATTT GA
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Protein sequence | MNVKVQDPTF ELALVSPFLL QTLAEVAANK GVEPQSLCRG LGFDFDDLQD PAQRISYRQA VAMIQRALKA LPNQGLGLWV GAQNVLGTLG LLGHVLSLCK TLRDAFEIGV RHQHTSGGIV VSSVDVVGDQ VYVDVECRLP FAEVQVFAVE EFFASLLVYG RALVGETFKP IAVEFMHAAP DYLDEYRRLL GPEVRFGCLH NRMLIDVQWL DVNLPNHHSL ALRQAVKLLE LEAAQVHQKL DLIQAVERAI ARDLSRGSHI EKIAADLNMS SRTLRRRLTE HSLTFEALLE QVRQARTMSL LANPDMPIER ITEEVGYSDV RSFRRAFKRW TGKSPSAWRS ASI
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