Gene Pfl01_3167 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3167 
Symbol 
ID3712927 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3635805 
End bp3636836 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content62% 
IMG OID 
ProductAraC family transcriptional regulator 
Protein accessionYP_348896 
Protein GI77459389 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGTAA AAGTCCAAGA CCCCACCTTC GAACTGGCGC TGGTGTCGCC ATTTCTCCTG 
CAAACCCTGG CCGAAGTCGC CGCCAACAAG GGCGTCGAGC CGCAGAGTCT GTGCCGTGGC
CTGGGGTTTG ATTTCGACGA CCTGCAGGAT CCGGCGCAGC GGATTTCCTA TCGCCAGGCC
GTGGCGATGA TCCAGCGTGC GCTCAAGGCT TTGCCCAATC AGGGGCTGGG CCTGTGGGTC
GGCGCGCAGA ACGTGCTCGG TACGCTGGGT CTGCTCGGGC ATGTGCTGTC GCTGTGCAAG
ACCTTGCGCG ACGCGTTCGA AATCGGGGTT CGGCATCAGC ACACTTCCGG CGGGATCGTG
GTTTCCAGCG TCGATGTGGT AGGCGATCAG GTCTACGTCG ACGTTGAGTG CCGGCTGCCG
TTTGCCGAGG TGCAGGTGTT TGCCGTTGAA GAGTTTTTCG CCAGCCTGCT GGTCTATGGC
CGGGCGCTGG TGGGCGAGAC GTTCAAGCCG ATTGCCGTGG AGTTCATGCA CGCCGCGCCG
GATTACCTGG ATGAGTACAG GCGGTTGCTG GGGCCGGAGG TGCGCTTCGG GTGCCTGCAC
AACCGCATGT TGATCGACGT GCAATGGCTG GATGTGAACC TGCCCAACCA CCATTCGCTG
GCGCTGCGTC AGGCGGTCAA GTTGCTGGAG CTGGAGGCGG CGCAGGTTCA TCAGAAACTC
GATCTGATCC AGGCGGTGGA GCGGGCGATT GCCCGTGACT TGAGCCGGGG CAGCCATATT
GAAAAGATTG CCGCCGACTT GAATATGAGC AGCCGCACTC TGCGCCGGCG GCTGACTGAG
CATTCGCTGA CGTTCGAGGC GCTGCTGGAA CAAGTGCGTC AGGCGCGCAC CATGAGTTTG
CTGGCTAATC CTGATATGCC GATTGAGCGG ATTACCGAGG AAGTCGGCTA CAGCGACGTG
CGTAGTTTTC GCCGGGCGTT CAAACGCTGG ACGGGGAAAA GCCCGAGTGC GTGGCGCAGT
GCTTCGATTT GA
 
Protein sequence
MNVKVQDPTF ELALVSPFLL QTLAEVAANK GVEPQSLCRG LGFDFDDLQD PAQRISYRQA 
VAMIQRALKA LPNQGLGLWV GAQNVLGTLG LLGHVLSLCK TLRDAFEIGV RHQHTSGGIV
VSSVDVVGDQ VYVDVECRLP FAEVQVFAVE EFFASLLVYG RALVGETFKP IAVEFMHAAP
DYLDEYRRLL GPEVRFGCLH NRMLIDVQWL DVNLPNHHSL ALRQAVKLLE LEAAQVHQKL
DLIQAVERAI ARDLSRGSHI EKIAADLNMS SRTLRRRLTE HSLTFEALLE QVRQARTMSL
LANPDMPIER ITEEVGYSDV RSFRRAFKRW TGKSPSAWRS ASI