Gene Pfl01_3138 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3138 
Symbol 
ID3712863 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3599828 
End bp3601771 
Gene Length1944 bp 
Protein Length647 aa 
Translation table11 
GC content63% 
IMG OID 
Productmulti-sensor hybrid histidine kinase 
Protein accessionYP_348867 
Protein GI77459360 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.825955 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACATG ACATCCGTCT GTTGATCGTC GATGACAACG TCGCCACTCG CTATGCCTTG 
CGCCGACGAC TGGAGCGCCA CGGTTACGAA GTGCTCGAGG CCGGCACCGG CGGCGAGGGG
CTGGCCCTGA TCGCCAGTCA GTCGCTCGAT GCGCTGATCC TCGACGTCAA CCTGCCGGAC
ATGAGCGGGT TCGACATCGT GCGTAAACTG CGCGCCGACC CGGGCACCGC CCTGCTTCCG
GTGATCCACG TGTCCGCCGC GTCGATCCAG ACCGGCGACA TCATCACCGG CCTCGATGCC
GGGGCCGATG CCTACCTGAT TCATCCGGTC GATCCCGACG TGCTGCTGGC AACGTTGCGC
ACCCTGCTGC GGGTGCGTGA CACGGAGAAC GCGTTGCGCG AAAGCGAGGC GCGTTTCCGC
GAGATCTTCG TCAACGTCTC CGCACCCATC GCGGTGCTCG ATGCCGATCT GAAAGTCCAT
GAGTGCAATC ACGCCTTTTC CCAGCTGATC CAGGACAACC GCGACCCGCA GACCCTCAGC
GAATGCTTTG CCGAGGATCA GAGCGCGATC CTCGACGAAC TGCGCCTGCG ACTGGTGGAC
GGCGAGCGCT GGAAGGGCAC GCTGAACATG CGCGTGCAGG GTGAGGTTCG CGAGACCGAA
TGGCAGATTT CGCCCTACCG GACTCCGAAG CTGAGCCTGG TGTTCGTCGA AGACGTCACC
GAACACCGTC ATCGCGAGCG CTCGCACCTG GCGCAGCTGG ACGACACCAC CACGCAACTG
GCCAAGGAAG TCGCCGACCG GGTACGCGCC GAATCGCAAC TGCTGCAAGT ACAGAAAATG
GATGCGCTGG GCAAGCTCAC CGGCGGCATC GCCCATGACT TCAACAACCT GCTGACCGGG
ATCATCACCA GCCTCGAACT GATCCAGAAA CGTGTTGCCG ATGGCCGAAC GGACAAGGTC
CAGTTCTACG CCGAAGCGGC TCTGAACTCG GCGAGGAGCG CGGCCTCGCT CACCCATCGC
CTGTTGGCGT TTGCCCGTCA GCAACCACTC GACACCCGTC CGGTCGACAT CAACAGACAC
GTCCGCTCGC TCGAAGAATT GCTGGTGCGC ACCATCGGCG AACGCATCGC CCTCAAGCTC
GAATTGACCA CCAAACCTGC CATCGCGCTG GTCGATCCGA TTCAGCTCGA AAGTGCGGTG
CTCAATCTGG TGATCAATGC CCGGGACGCA TTGCCACGGG GCGGCAATAT CTGGGTCAGC
ACTTACGCGG CGTACTCCCA CGGCGACCCG AACCTCGCCG ATGGATCCTA CGTGGCGCTA
TCGGTGCGCG ATGACGGTAC CGGCATCGAG CACAACGTGA TCGACAAGGT GTTCGAGCCG
TTCTTCACCA CCAAGCCGCT GGGCCAGGGC ACCGGGCTGG GGCTGTCGAC GATCTACGGT
TTTGCCCGTC AGTCCGGTGG CGATGCGCAC ATCCGCAGCG TCGCGCGACG CGGCACCGAA
GTGACGATCA TGCTGCCGGC CACCAGCGAT CCGACCGCTG TCGATGTGGC CCCGGTGACG
ATTGATCCGC AAGGCTCGGG CGAACATGTG TTGATCGTCG AAGACATGCC GGCGGTACGC
CTGTTCGTCA CCGAAGTGCT GGAAGACGCC GGTTACCGCT GCACCCAGGC CGGCGATATC
GAAACGGCGC TGGAACGCTT GCAGAACGAC GCGTCGATCG ACCTGCTGCT GACTGACGTT
GGTCTGCCAC GCATGACCGG CCGTGAACTG GCCGACGTTG CCCGGGGCTG GCGTGAGGGG
TTGCCGATCC TGTTCATGAC CGGTTATGCG GAAACCGCGA TCAACCGCCA GGTGTTCCTC
GGGGCGGGTA TGGACATGCT GGTCAAACCG TTTCAGATCA GCGCATTGCT GGACAAGGTG
CGTCGCACGC TCGACGGTGC CTGA
 
Protein sequence
MKHDIRLLIV DDNVATRYAL RRRLERHGYE VLEAGTGGEG LALIASQSLD ALILDVNLPD 
MSGFDIVRKL RADPGTALLP VIHVSAASIQ TGDIITGLDA GADAYLIHPV DPDVLLATLR
TLLRVRDTEN ALRESEARFR EIFVNVSAPI AVLDADLKVH ECNHAFSQLI QDNRDPQTLS
ECFAEDQSAI LDELRLRLVD GERWKGTLNM RVQGEVRETE WQISPYRTPK LSLVFVEDVT
EHRHRERSHL AQLDDTTTQL AKEVADRVRA ESQLLQVQKM DALGKLTGGI AHDFNNLLTG
IITSLELIQK RVADGRTDKV QFYAEAALNS ARSAASLTHR LLAFARQQPL DTRPVDINRH
VRSLEELLVR TIGERIALKL ELTTKPAIAL VDPIQLESAV LNLVINARDA LPRGGNIWVS
TYAAYSHGDP NLADGSYVAL SVRDDGTGIE HNVIDKVFEP FFTTKPLGQG TGLGLSTIYG
FARQSGGDAH IRSVARRGTE VTIMLPATSD PTAVDVAPVT IDPQGSGEHV LIVEDMPAVR
LFVTEVLEDA GYRCTQAGDI ETALERLQND ASIDLLLTDV GLPRMTGREL ADVARGWREG
LPILFMTGYA ETAINRQVFL GAGMDMLVKP FQISALLDKV RRTLDGA