| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_3130 |
|---|
| Symbol | |
|---|
| ID | 3712817 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | + |
|---|
| Start bp | 3593618 |
|---|
| End bp | 3594694 |
|---|
| Gene Length | 1077 bp |
|---|
| Protein Length | 358 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | |
|---|
| Product | strictosidine synthase |
|---|
| Protein accession | YP_348859 |
|---|
| Protein GI | 77459352 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 43 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.25811 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGATGGC GTTATCTGGT GTTGCTGCTG ATTATCGGGG TTCTGGCCTT TCTGCTGTTG
ATGCCGACCA AGGTCAAGCC CGTGGCCTGG ACGCCGCAAC CGGCGCCCTC GCTGACCGAA
GGCCAATACG CTGACAATCA GCGACTCAAG GGCGCGGCGC AAGTCGGCCC GAGCGACATC
GAAGGCCCGG AAGCGCTGTT GCTGGAAAAC GACTTTCTGA TCACCGGCCT GCACGACGGA
CGCCTGCTGC GCACCAGCCT CGACGGCCAG CAGCGCAAGG TGCTGGCGGA TACCGGCGGC
CGGCCGCTGG GACTGGCGCG GCATCCCAAC GGTTTGCTGG TGATCGCCGA CGGGGTCAAG
GGTTTGCTGT CCCTCGACGA GCAGGGTCGG CTGGTGGCGC TGACCACCGA AGCCAATGGT
CTGCCGTTCG GCTTCACGGA TGACGTGGCG ATCGACAAGT CCGGACACTA CGCCTACTTC
AGCGACGCCT CGAGTCGCTG GGGTTACGGT CACGATGGCG AAGCGATCAT CGAACATGGC
GGCGACGGCC GCCTGCTGCG TTACGACTTC CAGACCGGAA AAACCAGCCT GTTGCTGGAC
AAGCTGGAGT TCGCCAACGG CGTAACCCTC GGCCCGGAAG ACGCTTATGT GCTGGTCAAC
GAAACCGGCG CCTACCGCAT CAGTCGCTAC TGGCTGACCG GCCCCAGGGC CGGCACTCAC
GATTTGTTCA TCGATAACCT GCCGGGGCTG CCGGACAACC TCGCCTTCAA TGGCCGGGAC
CGGTTCTGGG TGGCGCTCTA TACCCCGCGC AATCCGCTGC TGGATAGCAC GGCCGGGCAT
CCGTTCGTGC GCAAGATGAT CGTGCGGGCG ATGACTGTCC TGCCCAAACC GGTGGAGAAA
CGCGGGTTCG TGCTGGGACT GGATCTGGAG GGCAAGGTGA TTGCCAATCT GCAGGATGCC
AGCGCCGGCA ATTACTCGCC GATTACGACG GCGCGCGAGT ATGGCCAGTG GTTGTATTTC
GGTTCGCTGA AGGCCACGCA CATGGCACGG ATGCCGTTGG AGGCAGCCTT GAAGTGA
|
|---|
| Protein sequence | MRWRYLVLLL IIGVLAFLLL MPTKVKPVAW TPQPAPSLTE GQYADNQRLK GAAQVGPSDI
EGPEALLLEN DFLITGLHDG RLLRTSLDGQ QRKVLADTGG RPLGLARHPN GLLVIADGVK
GLLSLDEQGR LVALTTEANG LPFGFTDDVA IDKSGHYAYF SDASSRWGYG HDGEAIIEHG
GDGRLLRYDF QTGKTSLLLD KLEFANGVTL GPEDAYVLVN ETGAYRISRY WLTGPRAGTH
DLFIDNLPGL PDNLAFNGRD RFWVALYTPR NPLLDSTAGH PFVRKMIVRA MTVLPKPVEK
RGFVLGLDLE GKVIANLQDA SAGNYSPITT AREYGQWLYF GSLKATHMAR MPLEAALK
|
|---|
| |